c8h5orf22 (cssa14h5orf22)


Basic Information

Item Value
gene id c8h5orf22
gene name cssa14h5orf22
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 64711467 ~ 64719874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985975.1
CGAGACTAAAATATAAAAACGACAATTTTAATGCATGACATATGCTCCAGCTATTCGACCGTGTTTCCAGTCGGTGTAAAAGAGACGGTGGACACTATCACACCAATCACAAGCTGGCTTTCAAATACCAGCCAATAGAAAGTCAGACATAGGAGAGAGAGGCGGTCGTGTTTGGGTTTTGTTTTCAGACAGGTGTCGCATGCAAACCTAAGTCTTCCTAGCTAATATTTCAGAGATTATTTGAAATTTACCTAGTTCACAAGTATAAACAACATCGGACTGAAAAATGAATTGTCCGCCATCGAAAAGGGTTTATGCCGATTTGCCCATATGGATCGTAGAAGATCACTGTGATGTGGTAAGTCCTATATATCGGGCTATAGCATCAAGGCACTTGCCGCTGAAGAACATCAAGATGGTCCATCTGGATTCCCACCCAGACCTCCTCATACCTGTCAATATGCCTGCAGATACTGTGTTTGACAAGGACTCCTTGCTCAGTGAGCTGAGCATTGAGAACTGGATCATGCCCATGGTATATGCTGGGCATGTGTCTCACGTGGCATGGCTCCATCCCTACTGGGCACAGCAGATCAAGGAAGGCGAGCACTCCTTTTCTGTGGGGAAAGACTCCTCCACAACCACCATCAGAGTTACAAGTAAGGACGATTACTTTTTAAGTGACGGCCTGTATGTTCCTCAGGATCAGCTGGAGAATCCTAAACCTCTGGGACTGAGTGTTGTCTTAGTGAACCCTGTGGCGTGTTGCCAGAGGGAAGACATGGGAAGGGACATTGAGAAGAGCTCTGCCAAAAGACCCAGGATAGAGAACAAGGGAGCTGGGGATTTGAATGATGCTCAACCCTCTGCTTCAGCTTCCAAGTCTGAAAGCAGCTCTAGTAGCTGTGATGACAGTGTTCAGCCACCAGGTGGCAGTATAACCCCAGGGAGCAGCAGCAATGGCAACAACAGAGAAGAGGAAAAGGAACCACTCAAAAAGCCTTGTTTGAAGACTGACAAGGATGTGGGTTCAATGACCTACGCTGTGAACAGCCTTCTCTCCGTTATCAAACAAACTGATCCATACATACTTGACATCGACCTTGATTTTTTCTCTTGTAAGAATCCTTTCAAGGAGATGTATACACAGGATGAGTACAATATTCTACAGGAGCTATACAGCTTCAGGAAACCTAGAGAAGACCCAGATGAGGAGGAGTTGACAGAGTGTGTGGAGAGACGTATCCGGCAGCTGGAGGATCTGGAGGCAGCATTTGCAGACCTGGTGGAGGATGATAGTGAGGAGACAGTCAAGCGCTGGGCTGCCAACCCTGGGATGACCTCTTTGGTAAAACTGGTGGGAAGCCTGCGGAGTCGAAACGAGGCCCCTGACTACGAAATGgtgcACCAGGCGGGGCTGACCTGTGACTACTCGGAGCTGCCCCACCACATCAGTAGTGAGGAGGAGGTTGAGAGACTGGTCCTGGCAGTGGAGCTCGTCCTGGAGGCCCTGCCGAAGCCCACCCTTGTCACTGTCTCCAGATCCAGTCTGGATGAGTACTGCCCAACTGAACAGGTAAACTCCATCCAGAGTAGGATACTAGCCGTCCTGGAGTCTTTATATGGCTCATTGGATGTCCATAAGGAGTACGAGACGAAACCAGAGGACAACCTGCCCAAGGCATCATGATACAAATCATCCTCATTTGTGATGCATCCATCAAATGACTGACTTTCACTCAGAAATCATGCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATTACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGTTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACAGATGTACTAGTTCATTTGAAAGGCTTTAAGTTTAaagtatgaattaatggttgaaAATCAAGATAGCATGTCTACCTGCTCCTGTTATTTTAGTTTTTCCTCAGGTAGGCAGGTGTATCAAACATATCTATATATCCCATGACCATTGTTACTGATACTGTACAATTTAATGAGGACAGTTTTTATCATTTGTGTTCCATTACTTGTTTGATACTTTCTTGCCCAGTCCAGACAATTTCATATGCAGGCATAATTCACTAAGTGAAAATTTGACTATGGAGCCATTTTACACTAAATGCAGTGATTGCACTGGCAAATTGTTCAACTGTATCTGTCGGAATTTTTCATTTAAATTAAtattaattttatttttatttccctTTGCTCATTTCGCAAATCTTTTCCATAGATGCATCCCTTCAATACAATCTGAGGAAGTGCTGAGGactcttttttttaaaatatttgttttattagttTTTTTCTACTTCAAAGCAGCAAATGAGTATGATTAGATCCTATCCTACCCCACCCACTTCGGTTTGTTTGCTCCCATTGCCAGTTGCTTAGCAACTCTATTCAGTACTGTCACATTTTCATCTCACTGTTTGTACAAATGTATAAATAGATTATTCTCTCGGTCAAGACTATTACATATTATTACAAAACTTTAATGTCTTGGCTGTCAATGCAGAGTACAATTTGTCCCAACTACAACACTGTCATTTTGAGTGTACAAGAATACCTATTCATGGTTGTACATGAATATATGAAACTTAATTTAATGTTATTCTCA
>XR_005052932.1
CGAGACTAAAATATAAAAACGACAATTTTAATGCATGACATATGCTCCAGCTATTCGACCGTGTTTCCAGTCGGTGTAAAAGAGACGGTGGACACTATCACACCAATCACAAGCTGGCTTTCAAATACCAGCCAATAGAAAGTCAGACATAGGAGAGAGAGGCGGTCGTGTTTGGGTTTTGTTTTCAGACAGGTGTCGCATGCAAACCTAAGTCTTCCTAGCTAATATTTCAGAGATTATTTGAAATTTACCTAGTTCACAAGTATAAACAACATCGGACTGAAAAATGAATTGTCCGCCATCGAAAAGGGTTTATGCCGATTTGCCCATATGGATCGTAGAAGATCACTGTGATGTGGTAAGTCCTATATATCGGGCTATAGCATCAAGGCACTTGCCGCTGAAGAACATCAAGATGGTCCATCTGGATTCCCACCCAGACCTCCTCATACCTGTCAATATGCCTGCAGATACTGTGTTTGACAAGGACTCCTTGCTCAGTGAGCTGAGCATTGAGAACTGGATCATGCCCATGGTATATGCTGGGCATGTGTCTCACGTGGCATGGCTCCATCCCTACTGGGCACAGCAGATCAAGGAAGGCGAGCACTCCTTTTCTGTGGGGAAAGACTCCTCCACAACCACCATCAGAGTTACAAGTAAGGACGATTACTTTTTAAGTGACGGCCTGTATGTTCCTCAGGATCAGCTGGAGAATCCTAAACCTCTGGGACTGAGTGTTGTCTTAGTGAACCCTGTGGCGTGTTGCCAGAGGGAAGACATGGGAAGGGACATTGAGAAGAGCTCTGCCAAAAGACCCAGGATAGAGAACAAGGGAGCTGGGGATTTGAATGATGCTCAACCCTCTGCTTCAGCTTCCAAGTCTGAAAGCAGCTCTAGTAGCTGTGATGACAGTGTTCAGCCACCAGGTGGCAGTATAACCCCAGGGAGCAGCAGCAATGGCAACAACAGAGAAGAGGAAAAGGAACCACTCAAAAAGCCTTGTTTGAAGACTGACAAGGATGTGGGTTCAATGACCTACGCTGTGAACAGCCTTCTCTCCGTTATCAAACAAACTGATCCATACATACTTGACATCGACCTTGATTTTTTCTCTTGTAAGAATCCTTTCAAGGAGATGTATACACAGGATGAGTACAATATTCTACAGGAGCTATACAGCTTCAGGAAACCTAGAGAAGACCCAGATGAGGAGGAGTTGACAGAGTGTGTGGAGAGACGTATCCGGCAGCTGGAGGATCTGGAGGCAGCATTTGCAGACCTGGTGGAGGATGATAGTGAGGAGACAGTCAAGCGCTGGGCTGCCAACCCTGGGATGACCTCTTTGGTAAAACTGGTGGGAAGCCTGCGGAGTCGAAACGAGGCCCCTGACTACGAAATGgtgcACCAGGCGGGGCTGACCTGTGACTACTCGGAGCTGCCCCACCACATCAGTAGTGAGGAGGAGGTTGAGAGACTGGTCCTGGCAGTGGAGCTCGTCCTGGAGGCCCTGCCGAAGCCCACCCTTGTCACTGTCTCCAGATCCAGTCTGGATGAGTACTGCCCAACTGAACAGGTAAACTCCATCCAGAGTAGGATACTAGCCGTCCTGGAGTCTTTATATGGCTCATTGGATGTCCATAAGGAGTACGAGACGAAACCAGAGGACAACCTGCCCAAGGCATCATGATACAAATCATCCTCATTTGTGATGCATCCATCAAATGACTGACTTTCACTCAGAAATCATGCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACACATGACTGACTTTCACTCAGAAATCATCCACTGGTGTCAGTGTGAGGATTCAGCCTGAAGATACACAGATGTACTAGTTCATTTGAAAGGCTTTAAGTTTAaagtatgaattaatggttgaaAATCAAGATAGCATGTCTACCTGCTCCTGTTATTTTAGTTTTTCCTCAGGTAGGCAGGTGTATCAAACATATCTATATATCCCATGACCATTGTTACTGATACTGTACAATTTAATGAGGACAGTTTTTATCATTTGTGTTCCATTACTTGTTTGATACTTTCTTGCCCAGTCCAGACAATTTCATATGCAGGCATAATTCACTAAGTGAAAATTTGACTATGGAGCCATTTTACACTAAATGCAGTGATTGCACTGGCAAATTGTTCAACTGTATCTGTCGGAATTTTTCATTTAAATTAAtattaattttatttttatttccctTTGCTCATTTCGCAAATCTTTTCCATAGATGCATCCCTTCAATACAATCTGAGGAAGTGCTGAGGactcttttttttaaaatatttgttttattagttTTTTTCTACTTCAAAGCAGCAAATGAGTATGATTAGATCCTATCCTACCCCACCCACTTCGGTTTGTTTGCTCCCATTGCCAGTTGCTTAGCAACTCTATTCAGTACTGTCACATTTTCATCTCACTGTTTGTACAAATGTATAAATAGATTATTCTCTCGGTCAAGACTATTACATATTATTACAAAACTTTAATGTCTTGGCTGTCAATGCAGAGTACAATTTGTCCCAACTACAACACTGTCATTTTGAGTGTACAAGAATACCTATTCATGGTTGTACATGAATATATGAAACTTAATTTAATGTTATTCTCA

Function

NR:

description
UPF0489 protein C5orf22 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985975.1 False 2921 mRNA 0.44 9 64711467 64719874
XR_005052932.1 True 2787 mRNA 0.44 10 64711467 64719874

Neighbor

gene id symbol gene type direction distance location
LOC110530341 LOC106569246 coding downstream 25813 64669470 ~ 64685654 (-)
LOC110530340 LOC106569246 coding downstream 45761 64657845 ~ 64665706 (-)
LOC110530336 LOC106569248 coding downstream 70531 64630945 ~ 64640936 (-)
LOC110530335 LOC106569249 coding downstream 91419 64557297 ~ 64620048 (-)
LOC110530333 NA coding downstream 166882 64539032 ~ 64544585 (-)
cdh6 LOC106569244 coding upstream 38526 64758400 ~ 64794173 (-)
cahz LOC100135827 coding upstream 410100 65129974 ~ 65135673 (-)
c8h10orf67 cssa14h10orf67 coding upstream 550122 65269996 ~ 65290810 (-)
paxip1 LOC106569237 coding upstream 669674 65389548 ~ 65408613 (-)
cnpy1 LOC106569234 coding upstream 706093 65425967 ~ 65447350 (-)
G734936 NA non-coding downstream 86167 64624877 ~ 64625300 (-)
G734933 NA non-coding downstream 89621 64621551 ~ 64621846 (-)
G734932 NA non-coding downstream 92557 64618686 ~ 64618910 (-)
G734930 NA non-coding downstream 95907 64615360 ~ 64615560 (-)
G734920 NA non-coding downstream 105524 64605546 ~ 64605943 (-)
G735049 NA non-coding upstream 102430 64822304 ~ 64822678 (-)
G735081 NA non-coding upstream 122616 64842490 ~ 64842697 (-)
G735166 NA non-coding upstream 170930 64890804 ~ 64891051 (-)
G735192 NA non-coding upstream 188244 64908118 ~ 64908398 (-)
G735830 NA non-coding upstream 215162 64935036 ~ 64935267 (-)
LOC110530961 dhx9 other downstream 2526287 62165849 ~ 62185180 (-)
G731764 NA other downstream 2663348 62045035 ~ 62048119 (-)
LOC110530228 LOC106569007 other downstream 6847590 57858233 ~ 57864165 (-)
G726900 NA other downstream 6864778 57820047 ~ 57846689 (-)
G726885 NA other downstream 6900045 57805388 ~ 57811422 (-)
G735880 NA other upstream 270427 64990301 ~ 65040241 (-)
G736216 NA other upstream 798293 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 1381222 66101096 ~ 66101627 (-)
LOC110530385 LOC106569212 other upstream 1473780 66192359 ~ 66210028 (-)
G737449 LOC106569204 other upstream 1839322 66559196 ~ 66560517 (-)

Expression


Co-expression Network