gs02 (gs02)


Basic Information

Item Value
gene id gs02
gene name gs02
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66798543 ~ 66801779 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124314.1
ATTATATTGGACTTGCCAGTCCTTTAAATTTTATTTAAAATTTCTCGTATTTCCAGGTGTTTTATAACAAACAAGATGGCTATGTCCGCCAGCGCCGAACTAAGTAAGGCTGTTAAACAGCAGTACATGGAACTCCCTCAGGGAGACAAAGTCCAAGTCATGTATGTCTGGATCGATGGAACCGGAGAGGGACTCCGCTGCAAAACCAGAACGCTGGATTCGGAGCCCAAGAGCATCGAAGAACTGCCGGAATGGAACTTTGATGGCTCCAGCACCTACCAGTCTGAGGGCTCAAACAGTGATATGTATTTGATTCCTTCTGCAATGTTCAGAGATCCCTTCCGCAAAGACCCCAACAAATTGGTATTGTGTGAAGTGCTGAAGTACAACCACAAGCCTGCAGAAACCAACCTTCGTTTGACTTGTAAGAAAGTCATGGACCTGGTTGAGAACCAGATCCCTTGGTTTGGCATGGAGCAAGAGTACACAATCCTAGGCACTGATGGACACCCATTTGGCTGGCCCAACAACGGCTTCCCTGGCCCACAAGGTCCCTATTATTGTGGAGTGGGATCTGACAAGGCCTATGGTAGAGATATTGTGGAAGCCCACTATAGAGCCTGTCTGTATGCTGGGGTCATGATCTGTGGCACCAATGCTGAAGTAATGCCTGCACAGTGGGAGTTCCAGGTTGGTCCTTGTGAAGGCATCACCATGGGTGATCACCTCTGGGTGGCTCGCTTCATCCTCCACCGGGTGTGTGAGGACTTTGGCGTGGTGGCCTCATTTGACCCCAAGCCTATCCCTGGGAACTGGAACGGTGCTGGCTGCCACACCAATTTCAGCACCAAAGAGATGCGGGAAGAAGGCGGGTTAAAGGCCATTGAGGAGTCCATTGAGAGGCTGGGGAGGAGGCATAGCTACCACATCCGTGCCTACGACCCTAAAGGGGGGCTTGACAACGCCCGTCGCCTCACCGGCCACCATGAAACCTCCAATATCCACGAGTTCTCTGCTGGCGTAGCCAACCGTGGCGCCAGTATCCGCATCCCTCGCACCGTGGGCCAGGAGAAGAAGGGCTACTTTGAGGACCGCCGCCCGTCGGCCAACTGCGACCCGTATGCCGTGACGGAGGCTCTGATCCGCACCTGTTTGCTCAGCGAGGAGGGAGATGAACCTGTGGACTATTAGACCCAACGAGATCCACTGCTCTCTGGACTTAGTCCCCTTCCCCCTCAccctcattttttttttttaatggctgAAAAGTCAAACTAGTACTGtatttgtcattttttttattttccactGAAATGATTCTAACCTTGCATTTTTATGTAGCTTAAAGTTGGCTGGTCAACTTAACATGGAATTAAATCTGGTGTTAACATATGGGGGGGAGGGAAAGAGTGTCTGACAGGGTATTGTCTTTCCCCTCTCGTGTTGGTTGTTTTCTAGTGGGGAGTATTTGTAATGTAACTGTTTAAGTCCTCATTTGGTCTCTTTCCCTGCAGTCTGTTGAACTGAAATGCTCTAAAGAACATATTGACACTGAAGACTAGGGCTGGGTGGCATGTGTCACTTTCTTAATAAAACCTATGGCTAGTTTGTGTACTTTGTATGTTGACCTGCCTTTTAAACTATGTACAGTTTCAATGTTAACTAACTAGGCAGTGTCTTTAAATGGCAACGTTTCTGTCTCCAGATTTGACACATTCCTGGATCATGTTGTCTGGTACATTCTTTAGATGTCTGGCTCCAAACACTGTCTTTTACATTTGGCTCAGTCTTGCCAATTGTAGCGTTCCTGTAAGACTCATGAAGAAGTtttatcctttttt

Function

NR:

description
glutamine synthetase

GO:

id name namespace
GO:0006542 glutamine biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004356 glutamate-ammonia ligase activity molecular_function

KEGG:

id description
K01915 glnA, GLUL; glutamine synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124314.1 True 1841 mRNA 0.48 7 66798543 66801779

Neighbor

gene id symbol gene type direction distance location
elovl1a LOC106569200 coding downstream 115596 66672460 ~ 66682947 (-)
LOC110530394 LOC106569203 coding downstream 139727 66649863 ~ 66658816 (-)
LOC118936436 LOC106569202 coding downstream 161609 66633925 ~ 66636934 (-)
LOC110530964 LOC106569202 coding downstream 166363 66623513 ~ 66632180 (-)
LOC118965631 NA coding downstream 179945 66610303 ~ 66618598 (-)
LOC110530968 LOC106569194 coding upstream 253379 67055158 ~ 67176168 (-)
LOC110530404 LOC106569189 coding upstream 676213 67477992 ~ 67528795 (-)
kdsr LOC106569188 coding upstream 728026 67529805 ~ 67537441 (-)
LOC110530405 LOC106569187 coding upstream 735973 67537752 ~ 67570811 (-)
LOC110530412 LOC106569180 coding upstream 967970 67769749 ~ 67818199 (-)
G737423 NA non-coding downstream 74046 66723819 ~ 66724497 (-)
G737419 NA non-coding downstream 75523 66720782 ~ 66723020 (-)
G737512 NA non-coding downstream 90633 66706688 ~ 66707910 (-)
G737504 NA non-coding downstream 104375 66693929 ~ 66694168 (-)
G737503 NA non-coding downstream 110920 66687091 ~ 66687623 (-)
G737582 NA non-coding upstream 26484 66828263 ~ 66828491 (-)
G737585 NA non-coding upstream 30166 66831945 ~ 66832150 (-)
G737609 NA non-coding upstream 65796 66867575 ~ 66868185 (-)
G737655 NA non-coding upstream 134554 66936333 ~ 66936535 (-)
G737897 NA non-coding upstream 233583 67035362 ~ 67035667 (-)
G737422 LOC106569284 other downstream 84047 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 238026 66559196 ~ 66560517 (-)
LOC110530385 LOC106569212 other downstream 588552 66192359 ~ 66210028 (-)
G736841 LOC106569214 other downstream 696916 66101096 ~ 66101627 (-)
G736216 NA other downstream 1269960 65518167 ~ 65528583 (-)
G738472 LOC106569192 other upstream 579441 67381220 ~ 67381977 (-)
G738502 LOC106569192 other upstream 618960 67420739 ~ 67421056 (-)
G738504 LOC106569192 other upstream 622084 67423863 ~ 67425339 (-)
igfbp1 igfbp1 other upstream 2348564 69150343 ~ 69157726 (-)
G740718 LOC106569160 other upstream 2607189 69408968 ~ 69430653 (-)

Expression


Co-expression Network