LOC110530404 (LOC106569189)


Basic Information

Item Value
gene id LOC110530404
gene name LOC106569189
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67477992 ~ 67528795 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613428.2
ATGTTCAACCAACCCACAGTGTGTAGCTGGAACACAGACAGCAATATTATTGTGGGATACAGTCTTCACTGCAGTCCCTCGAAACGTCTCTCCGTACGTGTAACAATATTCTGGATGCATGCGACGTTGATCTTCTTATGTGGTTTTTCggtcatgtatttttttttttggtagtgTAGACTACATTATGTGCACATCGAGAATATTTTAATCTCTTCCGTATTTCTGGCTGTCTGGATTTGGGAGTCTACAGATAACTGTAGCCACTTTTTGATCAAGGCTTCGAATATTTCCTTTTGATAGCACAATTGGGGAAACATTTTGATATTCTTACGTGGATATACTTGGACTTTTTCACGGTTTCAGCCTAGTTGGGTGAAGGGACCGTTTTTCAATCCACGCACATCGCTCCCGTTGCAGTGTTTCGTTCTGCACGGTTCGATAGTATCCTATAAACTTGACCAGAGCATTTTCTCAGAAATACACTTTTCGTCTGATCTGATGTATTGCGCGGCGCAGTGCATGTTGATAAGTACGATGTATTATTCTTAAAAACTAGGATTGTGGAGGTCATTATCAGTGCCAATCATAATGGCAAACGACGACAACCGCTGTATAGTGGAAAAGTACATTTGTCACAAACTCTTGAAAATTGGATATGCGTGGGATTTCGAGAATGCAGAGGAAGATGCTGATAATAATGGGTCGATGATTTCTCCTCCGCCTGGTTTGGCACGGCGGTGCCACGGGGCCAATAACGCCAGACCGGGCAGCGTCCCCCATCTTCCCAAACGGCTCTCCCAAACGGACCCGCATGCAGCTATTCACAGAGTTTTGCGTGAGGCCGGGGACGAACTCGAACGACTGTACCAGCCCGACTTTGCGGAGATGTCACACCAATTGTATCTCACGTCTTCTATGGCAGAAAGGAGATTCAGAGAGGTGATAGACGAGCTGTTCAGGGACGGGGTTAACTGGGGACGAATTGTCGCCTTCTTCGAGTTCGGTGGCACAATATGTGTGGAATGCGTGAACAAGGAAATGACGTCGCAGGTTGACCACATCGCTGGGTGGATGACGGAGTATCTAAATGGACCGCTGCACAACTGGATTCAAGAGAACGGGGGATGGGAGGCCTTTGTTGAGCTctatgacagacagagggactcCGTGTTCTGTTCATGGCCGTCCATCAAGACTGTCTTTGGCCTGGCTGCACTGGGGGCCGCAAGCCTTACCATCGGAGCTTACCTTACACAGAAGTGAAGgagtccccccccctcccctctctttctttttgtcctccctccctcctgctctcactcctttctcttttcAAAGGCCCCCTCCAAGATCCCCAACCTGCATGTCTTCAAAGCTTCTCTCCCCGTTCTCGGAAAAAACTCCCTATTCCTCACCCCTCACTTAAAAAAACAGACACAAATCAAACAACAGCAGGAAACGGAGTCACTGCCCACACAGAAGAAAATATGTCATGAAAGTCGTGCCATTTAACTGTAATCACAAAAAGTTTGGCTTGAAAAGAGACGAGAGGAAGGGAGGGTTGGTGTCGTTTTTGTTCTGCCTGCTTGAGTACTAGTTGTAGCATGAAACCTTTGTGTGCTCATGTAGACTTGTGTAGCATGTGTCGGTGAGGCAAAAGAAAGCATAGACACTCTTAGAAGaagggttccaaaatggttcctcggctgtccccataggagaaccctttttggtttcaggtagaactgtttggtgttccatgtagaaccctctgtggaaaggattctacatggaacccaaaagggttctacctggaaccaaaaatgtttttTCAAAAGGTTCCGCTATGGGGACTCCCTTCAACCCGCCTTCAAAGGACTTCCTCCACACAACAGCTGCTCTGAATGTATAATGGAAGGAGCTCGCTACTAACCAGCACGGTGTGTCTGTCCACCCACCGCTTCTATACTGCAATATACCAGGATACCAGGAGCATCACTGAACTCTGAACACAGAACAGTTAGTTACACACACCAGCTCTGACAACACGTCTTCTAGGCGCCACAGACGCAACTTGCTCTGCCTCTCTTAGAGAGATATGTAAGGACAATGCAGTAGAGTACATTTTTTTGCATTTGACCCATATGAAATGTAATAAGAGAAAGATCGAGGGGGGTATtaaagagagaatagagggaggtattgaagagagaatagagggaggtattaaagagaggatagagggaggtattaaagagagaatagagggaggtattgaagagagaatagagggaggtattaaagagaggatagagggaggtattaaagagaggatagagggaggtatTGAAGAGAGGCTAGAGGGAGGTATTGaaaagaggagaaagggaggtattgaagagaggatagagggaggtatTAAAGAGAGGATAAAGGGAGGTAttgaagagaggatagagggaggtattgaaaagaggatagagggaggtattgaaaagaggagagagggaggtattgAAGGCGTGAACAGCAGGTTGGTTAGAGCTTTTGGCAGCCCAAACCCCTGTTTGATCAATGTTTCTGACAGAAAGTGAAAAATATTATTCCACCTAGCTGGATTTCTGGCTTAGTCGAGATCAGAGGGGGAtcgagggatagaggtagatacagagaaagagaatgtgtgagagacaaaaagagggagagaaagtcaTAGAATGAGCAGAAATGTGGATACAGACAAAAAGAGATAAAGGTGTTAGGGTCAAACATAAGATGTGGATTCATTCCAAAGGTTCAGTGACAGTGAGCCTCCCTCTCCAGTTGCTAGAGGCGCCTCTACAGCCTGTTCTAAGATGTCTCACTTGGAGGAAGAACTGTGTCCCTGAATGGCCTGGCGTGGTTCTGTTTGGCCTCACGTCACTCCCTCCCCGTCAGATGTCTCTGAAATGCATTTCTTGTACTCTCACTGCCTCTTTTTATtactatctctcgctctctctctctctctctctctctctctctctctctctctctctctctctccctctctctctctctcctgccccctcCCCTCTGCCCATATGTATGACCAGAACTCAAGGTCTCACCCACCCAGACCAAGCCACCGCTGAAAGGGGACTGAACCAAACTGCCAAATCTCCCAGAACATGTCCTCCAGCTGCCGCTGGGCTCTGATCTAGGGGACAAAAAGGCCCCACATACCCCCCAACGGCCTACGCTAATGGTTGATCCCACATCTAGGAGGACCTCCGAACGTGCACCTCTCTCAGTTTCACAAACCGTAGCAGACTCCAACATGGGATACCCAACAAGAAAAATCCCTATTGGACACAAAGACTCTCTATTGTTTTGAAGTGACGTCCATTGTATTCCCAGTAACTGATATATTTGAGCCCCCTTGCTCCGAGTCTGTCGCTGCAATGGCACAGATCACAACATCTCTTTAGAGTAAACAATCATTTCCCAGAATACTTTAGGTGTTTGTCTAGTGTTGGAGATGACATAACCTTCTTGGAAAGGCTTACTATCCATAATATTTACTATTttgctctctctttcacacacacacacacacacacacacgtttatgtAGATAAGTATGTGTCGAGAAAATGTTGTTAACTCATCGCAATGATTTCTCTCACCAAaaatctctctctttgtctcggtCTTCTTTTATCAACGCAAAACACATGTCGTCTGAAGTTTTCATAGAATGAGTATTCACTATGTATacccatatttatgttagatGTTACACATACCAACTTATGATTTGTATTTATTGAGAGGTACCAGAACACAGATATTTAAATCATAGATGAGATGAAAAGTTAAGATCATGGAGACACTCAAATGTCTTGAGAAATCGTATCTTTCGTTTTATTCAAGGAACCACATTGTAACAATACACTATTTGGGGCTGCTATTGTATCAACAGTAGAGTAACATTTCTGTGTAAGACGTGTTAATATTGGTTTAACACTGCTGTACTGTATTAGTCCTGATTTCACTTAACTCACAGCTTCAAACTGCCACACAGATACAGTATTGTTATAGAAAGCTGTAAACCAAAGTGAACCTGTAAGTAACATTGTGTAGCATGAAGAGATAAACACATGCCAATTCACTTTCACTTCTTTTAAATATTGTCGGAGTGAGATTTTGCAGGAAAGGTTGTTGTAAAGACAATGtctggcaacctattccctttatagtgcactacttttgaccagggaccaaaGGACTCCatagtaaagtagtgcactatgtcaggaataggatgctatttgggagACAGTAAATATTAGCCTGCTTGGTGTTGTTCATAACATTTCAGTAGATACCGTAGCACCCGAATGCATCCATCTGGACATGTGTTAACCGGTGCTTGATTGATATACATGTATGTGTGGTAATTGTTAACATAGTAATGAATTCCTTCTCAAGCTTATGTAGTGACAGAAAAGTCTCCACGTCTTGCTAGATTCTATCATCATAACCAAGGGCACCATTCCTTTTCTATTTTAACAGAGGTCAATCCCCCTACTCATGATAAACCCTCCAGTGATATGTTCATATGAAAACAGAAATTAGTATGACATTTTTTTCAGGAGTTTAAacacaagataaaaaaaaaagtcacTAACTGACTTGTTCATAAATAAAATGTGTAAAGGTTTGTATGTGAGGAGGAGTCATTCTCATATTCCCTTCTGGGATTCTGTTTAAATGGGTGGAGCCTACATCACACCATGGTTATAGAGTTGTAAATATAATCCTCAACCTGTGGCACTTAAGAGGTCAAATCAAATGTGTTACCATTGTTTATGCTATGTATGTATCACAATAAGCTAGATGGGATCATGCTGTTCCCAATAAAGCACATCTTTCCTGCA
>XM_036986041.1
ATGTTCAACCAACCCACAGTGTGTAGCTGGAACACAGACAGCAATATTATTGTGGGATACAGTCTTCACTGCAGTCCCTCGAAACGTCTCTCCGTACGTGTAACAATATTCTGGATGCATGCGACGTTGATCTTCTTATGTGGTTTTTCggtcatgtatttttttttttggtagtgTAGACTACATTATGTGCACATCGAGAATATTTTAATCTCTTCCGTATTTCTGGCTGTCTGGATTTGGGAGTCTACAGATAACTGTAGCCACTTTTTGATCAAGGCTTCGAATATTTCCTTTTGATAGCACAATTGGGGAAACATTTTGATATTCTTACGTGGATATACTTGGACTTTTTCACGGTTTCAGCCTAGTTGGGTGAAGGGACCGTTTTTCAATCCACGCACATCGCTCCCGTTGCAGTGTTTCGTTCTGCACGGTTCGATAGTATCCTATAAACTTGACCAGAGCATTTTCTCAGAAATACACTTTTCGTCTGATCTGATGTATTGCGCGGCGCAGTGCATGTTGATAAGTACGATGTATTATTCTTAAAAACTAGGATTGTGGAGGTCATTATCAGTGCCAATCATAATGGCAAACGACGACAACCGCTGTATAGTGGAAAAGTACATTTGTCACAAACTCTTGAAAATTGGATATGCGTGGGATTTCGAGAATGCAGAGGAAGATGCTGATAATAATGGGTCGATGATTTCTCCTCCGCCTGGTTTGGCACGGCGGTGCCACGGGGCCAATAACGCCAGACCGGGCAGCGTCCCCCATCTTCCCAAACGGCTCTCCCAAACGGACCCGCATGCAGCTATTCACAGAGTTTTGCGTGAGGCCGGGGACGAACTCGAACGACTGTACCAGCCCGACTTTGCGGAGATGTCACACCAATTGTATCTCACGTCTTCTATGGCAGAAAGGAGATTCAGAGAGGTGATAGACGAGCTGTTCAGGGACGGGGTTAACTGGGGACGAATTGTCGCCTTCTTCGAGTTCGGTGGCACAATATGTGTGGAATGCGTGAACAAGGAAATGACGTCGCAGGTTGACCACATCGCTGGGTGGATGACGGAGTATCTAAATGGACCGCTGCACAACTGGATTCAAGAGAACGGGGGATGGtgttgaaggctgtcttccactcatccccttcGCTTATCCAAACTAGGTGGTAGGCATTCCAAAAGACCCAGCTTGGAGAAGATGGTAGCCCCCTGGAGAGGTTCGAAAgccgaggagaggagtggtaAGGTGTAACGATTCTTGATCGTTATGTCATAAGgccccggtagtcaatgcacaGACTTGTCCTTCTtttccacaaagaaaaaccctgcgccGGCAGGAGATGCAGAAGGACAGATGCCTCCAGTAGCCAGAGAATCCTCATTAtactcctccatggccttggtctcCGGACCGGATAGGGAATATAGCCGACCACGAGGTGGTGTGGTGCCTGGGAGAAAGTTAATGGCACAATCATAGGGACGATGCGGGGGACGAGAAGTAGCCCGTGCCTTGCTGAAGACCTCCAGGAGGTCGTGTTACTCTGTGGGGACGGCAGAGAAGTCCGAGGCTTGACTCAAGCCCTGAGGAGGACGTCTCAGGGAAGGCTGCACTGCTTTGAGGCAATGGGAATGGCAGAACGGACTCCAACCCAGGATGGAACTCGTGGTCCAGTCAATAACGGCATTGTGTTTTTGGATCCAAGAGTATCCCAAATCAACAAGAACATGGGGTATTCAATGAGGTGTAGCTGTATAGCCTCACTGTGATTTCCTGAAACCCGCAGATTAACAGGAGCAATGCTGTGAGTAACTCTTCCAATGGAGCGACCATCCAGTGCTCTAGCGGTCATGGAAACAGAGAGGAGTTGAGTGGGGATACCTAATTCAGAAACTAAGGTAGCGTCCATAAAACTCTCATccgccccagagtcaatgagcacccggAGAGACTTAgactggtctccccacagcagTATCACTAAAAAGGGAGTGCAGGTGATGGGAATTACAGGATTCCTAGTCTGGCTCCCCAGAGCACTTGTACCTACACTTGTACACTTGTACCTACTGAAGAAATTGGTCTCTTAACCAGACAGGTGGCTATATGAGGGAATCGAGGTCCAATGGTAACTCCATCTTTTATTTCCTCCGACAGTCCGTAAAGGAAGGTATCGAACAGAGCCtccggattccaggcactctcggcggCCAATGTGCAAAACTCTaccgcatagtctgccacactacgggagttCTGATGGTTTTTGGGCCGCCTCTCTCCCGGGCACCGGAGAATCGAATACCTTCATCACCTCCATCATGAAATCTTCCAGATTATGACAAACGGCGGACTGTTGCTCCCAAACGGCATCGCCCAGGAGAGTACCCTTCCGGACATTAGCATAATTAGATATGCTATCTTCAATCGATCCGAAGGGAATGAAGATGGCTGGAGCTCAAAACTGAGGGAGCACTGAGAAAGAAATTCCCGGCAGGTTCTAGGATCGCCAGAATATCActccggaggaggtaagcggTGTTCTTGGGGAGCCAGGGTAGGTTGAACAGACCCACCACTACTGAGTGGCTGGGAGGTCTCAGGTGTGGCGTGCTGCTTGCGAGCTAATTCACGGAATTGCTCCGTCAATGCCTTGAACCCCAGGTCGTGGCGTTCTGCCAGAGATCGGAACCCTTCCATCAGGTTCTGAAGTAGCTCCTCCTCTCCTAATGGTAGCTCCCTGCAGGGATACAGgacggagctggtccaagtctgctgggtcagtcatggccagttcgtactataacAACACAAGCACAAGGACTGGTGTGACACAGATATTGTATTTTCTGCTTTttaaagctggtgtacaaaactgaaagtaaaagactcAAAAACGAAaagctgtgcaaagctgtcatcaaggcaaagggtatctactttgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613428.2 False 4925 mRNA 0.44 2 67477992 67528795
XM_036986041.1 True 2965 mRNA 0.49 2 67515076 67528795

Neighbor

gene id symbol gene type direction distance location
LOC110530968 LOC106569194 coding downstream 301824 67055158 ~ 67176168 (-)
gs02 gs02 coding downstream 676213 66798543 ~ 66801779 (-)
elovl1a LOC106569200 coding downstream 795045 66672460 ~ 66682947 (-)
LOC110530394 LOC106569203 coding downstream 819176 66649863 ~ 66658816 (-)
LOC118936436 LOC106569202 coding downstream 841058 66633925 ~ 66636934 (-)
kdsr LOC106569188 coding upstream 1010 67529805 ~ 67537441 (-)
LOC110530405 LOC106569187 coding upstream 8957 67537752 ~ 67570811 (-)
LOC110530412 LOC106569180 coding upstream 240954 67769749 ~ 67818199 (-)
LOC110530414 LOC106569178 coding upstream 412520 67941315 ~ 68125947 (-)
LOC110530416 LOC106569176 coding upstream 634573 68163368 ~ 68180025 (-)
G738507 NA non-coding downstream 47955 67429266 ~ 67430037 (-)
G738508 NA non-coding downstream 49014 67428224 ~ 67428978 (-)
G738506 NA non-coding downstream 50670 67426966 ~ 67427322 (-)
G738504 LOC106569192 non-coding downstream 52653 67423863 ~ 67425339 (-)
G738503 NA non-coding downstream 54293 67423242 ~ 67423699 (-)
G738587 NA non-coding upstream 47525 67576320 ~ 67576541 (-)
G738616 NA non-coding upstream 144217 67673012 ~ 67673616 (-)
G738670 LOC106569186 non-coding upstream 154438 67683233 ~ 67683955 (-)
G738613 NA non-coding upstream 163365 67692160 ~ 67693632 (-)
G738782 NA non-coding upstream 334758 67863553 ~ 67863902 (-)
G738502 LOC106569192 other downstream 56936 67420739 ~ 67421056 (-)
G738472 LOC106569192 other downstream 96015 67381220 ~ 67381977 (-)
G737422 LOC106569284 other downstream 763496 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 917475 66559196 ~ 66560517 (-)
igfbp1 igfbp1 other upstream 1621548 69150343 ~ 69157726 (-)
G740718 LOC106569160 other upstream 1880173 69408968 ~ 69430653 (-)
G741077 foxc1 other upstream 2196979 69725774 ~ 69727431 (-)
G741177 NA other upstream 2253494 69782289 ~ 69783294 (-)
LOC110530971 NA other upstream 2623012 70148848 ~ 70160838 (-)

Expression


Co-expression Network