igfbp1 (igfbp1)


Basic Information

Item Value
gene id igfbp1
gene name igfbp1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69150343 ~ 69157726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124561.1
ATGCTTGGATTATATAAGAAGTTGACCCTGCTGGCGGCGATGTCATTGTCCCTCCTGACCACTCTGGCCCAGTCTTCCCCTGTGGTGGGCCCGGAGCCTATTCGCTGTGCCCCCTGTACCCAGGAGAAGCTGGATGAATGCCCGGCCATCTCCCCAGACTGTAAGCAGGTTCTCAGGGAGCCAGGCTGTGGCTGCTGCATGGCATGTGCCCTGGAGAAGGGGGCCTCCTGTGGGGTATACACGGCCCACTGTGCTCAGGGGTTAAAATGCAGCCCAAGAGCTGGGGATCCTAGACCCCTCCACTCCCTCACCAGAGGACAGGCCATCTGCACTGAGGACCAGGGACAAGAGAAAGTAGAAGGGGTGCCAGACCACAGCTCCCTAGCCTACTTCCTGGGACTCAACACCCCCTTTGACACCAAAAATGAGGGTGCTCAGGAGAGCATCAAGGCCAAGGTCAACACCATCCGCAAGAAACTGGAGGAACAGGGTCCCTGCCACATTGAGCTGCATGCAGCTCTGGACAAGATAACCAGCTCTCAGCAGGAACTAGGAGAGAAGTTCACCAACTTCTACCTACCCAACTGTGACAAACATGGCTTCTACAAGGCCAAGCAGTGTGAGTCGTCTCTGGTGGGACCCCATGccaggtgttggtgtgtgtccTCCTGGAATGGGAAGAAGATTCTGGGGTCCAATTATCTACCCGGCTTAGAGTGCCAGCTGGAGCTCTAA
>TU840819
agaaagaaggaaaccTATAGATGcctatctacagtatattgtgCTTCTCATAAGTACTTGAGGACTAAGCAAAAACTACACTTGAAGATTAAAGACCGCACTTGAAGAAAATTCACATCTACACCTGACTGTAGATTTTAGTGGCTTTCTACACCTGAAGATTCGAGATGCTTGGATTATATAAGAAGTTGACCCTGCTGGCGGCGATGTCATTGTCCCTCCTGACCACTCTGGCCCAGTCTTCCCCTGTGGTGGGCCCGGAGCCTATTCGCTGTGCCCCCTGTACCCAGGAGAAGCTGGATGAATGCCCGGCCATCTCCCCAGACTGTAAGCAGGTTCTCAGGGAGCCAGGCTGTGGCTGCTGCATGGCATGTGCCCTGGAGAAGGGGGCCTCCTGTGGGGTATACACGGCCCACTGTGCTCAGGGGTTAAAATGCAGCCCAAGAGCTGGGGATCCTAGACCCCTCCACTCCCTCACCAGAGGACAGGCCATCTGCACTGAGGACCAGGGACAAGGTAGACTCTGCTTTTTGTCCTTTTTGTTTTTCATTCATTGATTCCTTCCTTCAGCTATTACTTATTTATAAAGATGTTGGACAATCTACAAATTAAACCTTTTTTGACAACATAATCAAAAGGATAGAATCTAAACTTATGTAAAACATGGTGTACCTACCCACTAATTTCTCTCTCTAATCCACAGAGAAAGTAGAAGGGGTGCCAGACCACAGCTCCCTAGCCTACTTCCTGGGACTCAACACCCCCTTTGACACCAAAAATGAGGGTGCTCAGGAGAGCATCAAGGCCAAGGTCAACACCATCCGCAAGAAACTGGAGGAACAGGGTCCCTGCCACATTGAGCTGCATGCAGCTCTGGACAAGATAACCAGCTCTCAGCAGGAACTAGGAGAGAAGTTCACCAACTTCTACCTACCCAACTGTGACAAACATGGCTTCTACAAGGCCAAGCAGTGTGAGTCGTCTCTGGTGGGACCCCATGccaggtgttggtgtgtgtccTCCTGGAATGGGAAGAAGATTCTGGGGTCCAATTATCTACCCGGCTTAGAGTGCCAGCTGGAGCTCTAAATCATGGACACTCTGACCCACATTCACAGGCACATGCATGCACATGTATTGACACATATACAGTCTTTTTTACTCCGCTTAAACACACATGTAGGTGCCCTCAAACCTACACACATCCACATCATATATACTGACTGTCTTTTACTAACACGTATAAATACACACTCATTCAAATaagcacacttttttttttaatgtaattaCTCTTAATTTATTTACGTGACGTATCACACCTTATTTATTCAAAACGCGTATGTGCTTACAAGTATGGACCATTTGTCATTTTTAGATTGTTTATGTTTCCTATTTTCTGATTGTAAATAGGGCAACAGTGTATGCATTTGTGTTTCTGACTAAATAACTCCATCTCTGAAGACCACAGGTCTCCAGCTCTGCCAAACCCAGTTCAGGGTCTTCAGAATCTGTTTTTGATTCATTCAACCAGGTGGACCCGTGCACAGTAAATGAAACAACAcagccattcattcattcaacatGTTGACAGTTTCGGAAGGTATTCTCATTGACATTTCCTCAATGGGTATTGGGGAAATGCTTAAAGTTCCACAAGTATGCATCTGGTGGCTAAGGCACAAACATATCACTGCTCATCCAAGCCCCTGTTTGGTTTTGGGGGAGTTTCTGTCTTCATCTACCTCTACTGGTCTCTGCAGGTCTTCtggtttagcagatgtttttttttgggACAGTTTTTTTTCTCCCAACTCTCTGCACGTACACCACCCTCTTCATGTGAGGTCATTGTTTCATTTGTCTGAAAGGAAGTTCTCTTTTGTTTGATGTAAGGTCTGTATTTATTATATGTCAAACTATTCCTGACAGCAAGTCAGAAATATGTGATGAGATATGCTGCTATGACTTTTTGTTTGGTTTGTTACAAATCATTTATGGCCTATGTTAGTTACTCTGTTGTAATTTTGTGCTTTCAATAAACACGTTAACCTCA

Function

symbol description
igfbp1 Enables insulin-like growth factor I binding activity and insulin-like growth factor II binding activity. Predicted to be involved in regulation of insulin-like growth factor receptor signaling pathway. Located in Golgi apparatus. Implicated in diabetic angiopathy. Biomarker of breast cancer.

NR:

description
insulin-like growth factor binding protein 1 precursor

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124561.1 False 735 mRNA 0.56 4 69151310 69157559
TU840819 True 2056 TUCP 0.44 3 69150343 69157726

Neighbor

gene id symbol gene type direction distance location
LOC110530426 LOC106569167 coding downstream 156050 68908995 ~ 68995260 (-)
LOC110530425 tbb2a coding downstream 243122 68901719 ~ 68908188 (-)
LOC110530423 LOC106569170 coding downstream 295276 68834340 ~ 68856034 (-)
LOC110530422 LOC106569171 coding downstream 504564 68542258 ~ 68646746 (-)
LOC110530421 LOC106569173 coding downstream 840273 68303741 ~ 68311037 (-)
LOC110530970 LOC106569164 coding upstream 25608 69114482 ~ 69240965 (-)
si:ch73-40a17.3 mep1b coding upstream 276983 69434542 ~ 69450423 (-)
LOC118965618 rnf138 coding upstream 304361 69461920 ~ 69474389 (-)
LOC110530436 rnf138 coding upstream 319747 69477306 ~ 69487134 (-)
LOC110530438 ripk1 coding upstream 379609 69537168 ~ 69553690 (-)
G740468 NA non-coding downstream 1497 69146733 ~ 69149813 (-)
G740478 NA non-coding downstream 82117 69068630 ~ 69069193 (-)
G740448 LOC106599719 non-coding downstream 126438 69024018 ~ 69024872 (-)
G740438 NA non-coding downstream 144703 69006333 ~ 69006607 (-)
G740437 NA non-coding downstream 145079 69006005 ~ 69006231 (-)
G740604 NA non-coding upstream 93340 69250899 ~ 69263627 (-)
G740684 LOC106569160 non-coding upstream 198355 69355914 ~ 69357999 (-)
G740685 NA non-coding upstream 201823 69359382 ~ 69359622 (-)
G740689 NA non-coding upstream 207608 69365167 ~ 69365498 (-)
G740691 NA non-coding upstream 209836 69367395 ~ 69367614 (-)
G738504 LOC106569192 other downstream 1725971 67423863 ~ 67425339 (-)
G738502 LOC106569192 other downstream 1730254 67420739 ~ 67421056 (-)
G738472 LOC106569192 other downstream 1769333 67381220 ~ 67381977 (-)
G737422 LOC106569284 other downstream 2436814 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 2590793 66559196 ~ 66560517 (-)
G740718 LOC106569160 other upstream 251409 69408968 ~ 69430653 (-)
G741077 foxc1 other upstream 568215 69725774 ~ 69727431 (-)
G741177 NA other upstream 624730 69782289 ~ 69783294 (-)
LOC110530971 NA other upstream 994248 70148848 ~ 70160838 (-)
LOC110530449 NA other upstream 1041352 70198887 ~ 70200278 (-)

Expression


Co-expression Network