si:ch73-40a17.3 (mep1b)


Basic Information

Item Value
gene id si:ch73-40a17.3
gene name mep1b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69434542 ~ 69450423 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613494.2
CATGTACTTTTATCTGGTCTATCGGACTAGCTTAGCACCTTTTTCAAGTCTGTCTGAGAGGCCAAGGCTACTAATTCTTAGTGTTCCATACTAAGGGATTCTTTGACTAGGGAGTAAACATGGGGAGGAGAACTACATATTTAGTCATCCTCCATATTTCATGGATCTTATGTGAAAATGTCTTATCTCTGCCTACACCAAGAGTTTTAGAATATGATGTGGATGGTGGAAGGGACATGGACATCTTTGATATCAATGAAGAGGCTGGGTTAAACCTGGTGGAGGGGGATATTGAGCTTGATGAGAAACAAGGCCGGAATTCTATAATAGGGGATCAATACAGATGGCCAAAGACTGTTCCCTACTACTTTGAGGATGACTTGGAGATCAATGCAAAAGGTGTTATCCTGAAGGCCTTTGAACAGTATCGCCTGAAGACCTGTATCGACTTCAACCCCTGGGAGGGAGAGCAGAACTACATTTCCATTTTCAAAGGAAGCGGTTGTTTCTCATCTGTGGGTAACCAACATGTGGGGAAACAGAGGTTGTCCATCGGGACCAATTGTGACCGCATTGCGACCATCGAACACGAATTCCTCCATGCACTGGGTTTCTGGCATGAGCAGTCACGGTCGGACCGCGATGACTACGTCACCATCCTGTGGGACCACATCTCTGAGGGTAAGGAACACAACTTCAACACGTACAATGACACCATGTCCAGTTCTCTGGGTGTCCCCTACGACTACGGTTCCATGATGCACTACAGTAAGACTGCGTTCAGGAACGGTACCGAGCCCACAATCGTCACCAAGATCCCCGCCTTCGCTGATGTCATCGGTCAGCGCATGGAGTTCAGTGATAATGACCTGCTCAAGCTACGGCGTCTCTACAACTGCACACGCTCCTCCACTTTCCTGGACACCTGCGACTTTGAGAGAGAGAACATCTGTGGTATGATCCAGGGGCCGGGGGACCAGGCAGAATGGACAAGGGTGACCCAGGCGCCTGGCGGGCCCAACACGGACTACTCCAACATGGGCAAATGCACCGGCTCAGGCTACTTCATGCACTTGAGCACTGCCACAGGCAAACCAGCAGACACAGCCAGGCTGGAGAGCAGACTGCTCTACCCCAAGAGAAGCTACCAGTGCCTGCAGTTCTTCCTCTACAATGGTGGTGGCGCCAACGATCAGCTGGTGATCCTTGTCCGAGAGTACGATGAAGCCCACCCCAATGGAACCCTGCGTGTTATTCAGCCCATAGTTGCACCACCTCAAGACCTATGGCACCTGCACCATGTGAGCCTGAACGTGGTCAAGAAGTTCCGGGTGGTGTTCGAGGGCATCAAGGGTGACGCCCCCTCCACAGGTGGTCTCTCCCTGGACGACATCAACCTCTCTGAGACTACCTGCCCCGACCACGTGTGGCGGGTGAAGAACTTCAGCCACATCATGGAGACCACTCCTAACGACAAACCCATCTACAGCCCCCCGTTCAAGTCCAGAGAGGGCTACACCTTCCAGATGGGGCTCTACCCCAGTGGGAAGGAGGGCTACGCGGGGGAGCTTTCTGCCTACGCCCACCTGGTGACCATGACCGGTGACACAGAGGTGCGGAAGTGGCCGTGTCCGTGGAAACAGATGACCATGATGCTGTTCGATCAGAACCCAGACATCATGAGGCGTATGAACAACCAGCGCAGTGTCACCACCGATCCTACTAAGAAACTCAGTGAGACTTCAGAGCTGTTCTTCTGGGATGACCCTCGTAAGGTGGGCGTTGAAGTGTCAGCGGCGGATGGGACCAAATATTTTCGTGGGCCGGGTGCCGGGACAACCGCGTACCTCACCCATGGCAGGGCCAAGAGCAGGGACTTCATCAAGGGGGGAGACGCCATCTTCCTGCTTACCATGGAGGATGTGTCACATCTTACGGTGACCCAGCCCGTACCCTCCTCCACATTGCCACCAGTCACCACGGTTACCACCGCCATATTGCCACCTACTGACCCCTGCACTAAGGTCACATGTGGGAATGAGGGCGTCTGTGTGGTGGATGCTGGAAATGCTCTTTGCAGGTGTGCAGTTGGTGACGACTGGTGGTACTACGGAGAGAGTTGTCAGTATCAGGGTTCCACCCAGGACACGATGACCACAGCGCTTATAGCCTCTTTCTCTGTGCTGGGTGGCATGTTGGTGGTGACtgcagtcagtgtggtgtgtgtgaagaGGAAAAACAAGAACAGCGGAGGTGGAGGAGACCGGGGCATCACCATGTCCAATGTCACCGTCACAGGAATGTAATGTTTTTCCCCCTGCCAGAACCAAAACTATTCATGGCCAGCATTAAGTAGATGAAGAAGTTAACTACAAAAGCTACAACTCCTTCAAATATAAAATGACAAAAGATCTACTGGAAATTCCACTTAATGTCTCATCCCAATAATGATCTGCCTATCAGCCATGTATTTTGATCAGCCTGTTCATTTGACATGatttgtagtttatttgtgtaTGTAAATCTCCAACTATTTTCTTGTGTTAAATTTTTATTTAAACACTTGAAAGGGGGACGTGCTCTACCTCTCCCGCACAGGttattttcatttaccttaacatcccatttttttttgtatttgtgtgcaaatttaaaaaaaaatcctaaatATGCTATGAAGTGTATGTATTGTTCAGGGCATACGCTACATTAGTGTTGCTGTCATGTCATTTTCATATCAGACTCTTAATAGTTTTAAATTGAGAATTATATCTGAAATGTTTATTTAGTTGCAGTCATGGAATGGAAGGCATTAGGGGCATAAATATAATAAGTGGTTCTAAAGTTCGTCTGATTTTGAAATTAATGAGATGCTAATATAAACATTTGACAATATTGACCTCTTCTGGTCATAAGGTGCACATACATCTGATTTTCGAATGAGGGCTCTATTCAATAAGTAGCACTGAAGTTCTGTGTTGTAGCCAGATTGACATTTAgaggcaatgttcccgcgttagCAGACAcggcattcacggtaaacgctacATGTCagctcaattggaaattacctCTAAATTTCAAGCGTGCTATAGAGCCAAACTTCAGCTATagagattgaatagagcccttactCAAACTAGAGCTATAGTATGACACATGTGCAATGAGATTATCCTGCATTTCTGGATAACAGTAATTTGAAATTGTATTGTAAAGTATAATTGAAAGCTATCAGCTATACTTATGGCTGTTTTTTGGTTTATAGGAACTTAAAATTGTATGACCTTAATCTGCAAAATACAAGTGGGTCATACATTGAAAAAGGGGAGGAATTACTGAGAGAAATGATTGTATACAAGTTTACACATGTGTCaaacgcacacagagagagaatttAAAATGTCACTGCAAAATATAAAATACCACTAGAACAACAAAGCTTACAAATGTAAGATTTATTATACCAAA

Function

symbol description
mep1b Enables identical protein binding activity. Predicted to be involved in inflammatory response and proteolysis. Predicted to act upstream of or within toxin transport. Is integral component of plasma membrane. Part of meprin A complex.

NR:

description
meprin A subunit beta-like

GO: NA

KEGG:

id description
K08606 MEP1B; meprin B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613494.2 True 3471 mRNA 0.47 14 69434542 69450423

Neighbor

gene id symbol gene type direction distance location
LOC110530970 LOC106569164 coding downstream 201548 69114482 ~ 69240965 (-)
igfbp1 igfbp1 coding downstream 276983 69150343 ~ 69157726 (-)
LOC110530426 LOC106569167 coding downstream 439282 68908995 ~ 68995260 (-)
LOC110530425 tbb2a coding downstream 526354 68901719 ~ 68908188 (-)
LOC110530423 LOC106569170 coding downstream 578508 68834340 ~ 68856034 (-)
LOC118965618 rnf138 coding upstream 11497 69461920 ~ 69474389 (-)
LOC110530436 rnf138 coding upstream 26883 69477306 ~ 69487134 (-)
LOC110530438 ripk1 coding upstream 86745 69537168 ~ 69553690 (-)
LOC110530443 LOC106569150 coding upstream 606080 70056503 ~ 70095135 (-)
LOC110530971 NA coding upstream 698425 70148848 ~ 70160838 (-)
G740681 LOC106599727 non-coding downstream 3058 69431270 ~ 69431484 (-)
G740718 LOC106569160 non-coding downstream 4023 69408968 ~ 69430653 (-)
G740711 NA non-coding downstream 37530 69396618 ~ 69397012 (-)
G740710 NA non-coding downstream 40843 69393499 ~ 69393699 (-)
G740708 NA non-coding downstream 42077 69392248 ~ 69392465 (-)
G740816 NA non-coding upstream 72966 69523389 ~ 69523687 (-)
G740817 NA non-coding upstream 73802 69524225 ~ 69524461 (-)
G740963 NA non-coding upstream 107328 69557751 ~ 69557980 (-)
G741021 NA non-coding upstream 201418 69651841 ~ 69661122 (-)
G741071 NA non-coding upstream 270066 69720489 ~ 69720841 (-)
G738504 LOC106569192 other downstream 2009203 67423863 ~ 67425339 (-)
G738502 LOC106569192 other downstream 2013486 67420739 ~ 67421056 (-)
G738472 LOC106569192 other downstream 2052565 67381220 ~ 67381977 (-)
G741077 foxc1 other upstream 275351 69725774 ~ 69727431 (-)
G741177 NA other upstream 331866 69782289 ~ 69783294 (-)
LOC110530449 NA other upstream 748488 70198887 ~ 70200278 (-)
G742038 NA other upstream 1068964 70519387 ~ 70525951 (-)

Expression


Co-expression Network