XLOC_025986


Basic Information

Item Value
gene id XLOC_025986
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 3268737 ~ 3269941 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052906
tttttttttacttattgcaAAATCTGAAATCTTAAATTTTAAGGGATAGGACAATCTCCAATAATACACAAGCTCATAACATCTTTCTAAACTCGTCATACATGGCAGTCGCTCTTGTCCTTCTGTTCTCCACCTGTTTTGGCTTTTGTATGTTGGATTTGATCTGCCTAGTCAGATTGTGCAAAGtatgctcttgacacatgaacgCTGTTTTCATTGTGCATTGCTTTTGttggtttacattttttgtgCCTTTTTAATGGTTCCACCTTGTCCACACTATGCAGACCTGCTATTAGTCAAATCTGGTTTACATGTTGGTGTTGACACCGTAATGCCTGCTGTTGAAATCTGGGCTGTCTGTTCATGATCTCTTTGATTGGCCTTGATTTATTGCATGGTGTTCCCTGATTCATGTTAACATTACAATTATACAACCTGTAGACTACAATAAGGGATGCCGGCCAGATATGCACAGTgcacatttttgtatttaattgctATGCAACACGTGTTTAAAGGTTAGTATGAAGATTATAATAAGATTGTTTCTCTAGAAAGCAATAATTACAGTATAGGCATAGTCCAATTATAAAATGCTTCCTAAGTGGTCCTGAGATGTCCATCTTTTAGAGTGCAGGGGTTCATCAGTGTAGACCAGATCTCTACTTGCTTTATCCATTTAAATGCAAAACTGTGTCAGACACAGATGTGTTCAATACTGGGTTGCTTGTGATTGCAATACATTTAGCGATGGAAATTTTTGCAGCGTGAATGTATATTTTTGGGAATCTGTGTCATTTTGCGTCGGCCTGGTGTTCCAAAATCAAGGACCCCAAGAAGAAACTAAGGTATTGATCTTTAAACCATCAGTTGTGCATTTCACCAAGCACTTTTAAAGTGACCGGTACTTTATTCTTCGCTGTGGTGTCTAAGTAATATCTGTTGGATTCCTGAAGGTCTGCTTGTGACACCTACTGTCGAGCAATCTGACGTTTATGCTGAACGGTGGATCAAACACCGGCTTCATAGAAATGCAAAGAGTCATAATCACTGTGGTCCTACAGAGACCCTTCAGGAAATGAGGCTTGAAGGAGtggGATCCCTCATCATCAGGTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052906 True 1119 lncRNA 0.39 2 3268737 3269941

Neighbor

gene id symbol gene type direction distance location
XLOC_025985 NA coding downstream 1220 3265821 ~ 3267517 (-)
XLOC_025984 si:ch211-229i14.2 coding downstream 58097 3200912 ~ 3210640 (-)
XLOC_025983 AL953907.1 coding downstream 79682 3181205 ~ 3189055 (-)
XLOC_025973 NA coding downstream 103744 2475005 ~ 3164993 (-)
XLOC_025972 NA coding downstream 105002 2473430 ~ 3163735 (-)
XLOC_025987 AL953907.2 coding upstream 11793 3281734 ~ 3297913 (-)
XLOC_025988 tmem184bb coding upstream 44009 3313950 ~ 3328097 (-)
XLOC_025989 BX322654.1 coding upstream 113149 3383090 ~ 3383207 (-)
XLOC_025990 si:dkey-46g23.2 coding upstream 116280 3386221 ~ 3398383 (-)
XLOC_025991 zgc:171446 coding upstream 132282 3402223 ~ 3413680 (-)
XLOC_025982 NA non-coding downstream 112030 3156422 ~ 3156707 (-)
XLOC_025995 NA non-coding upstream 257308 3527249 ~ 3554127 (-)
XLOC_025996 NA non-coding upstream 275915 3545856 ~ 3603505 (-)
XLOC_025997 NA non-coding upstream 301104 3571045 ~ 3573373 (-)
XLOC_025998 NA non-coding upstream 364590 3634531 ~ 3639167 (-)

Expression


Co-expression Network