G672754


Basic Information

Item Value
gene id G672754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10968563 ~ 10972832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU766353
GGTTATCATCTTGGTGCATTAGGCATTTGcacgagagggagagacagagaaagagtgagagacagagagaaagagagagagagacagtgatgtgGCAGTAGAAAGGCCACAAGGGCCGGTGGCTTTAGGCCTTGTTAGTAATTAGTCGCCACAGAACCAGCCTTACAGAGCTTGGCCCCATCCCGAACTGgctttttaatttttaaaatctAGAATACAGATGTTTGATTATATAACGTCCAAATTCATGATCACGTTTAAAAACATTAACACTTCAATCGCATTCATTTGGcatcaaatggaagaaaacaaactgaaacaAGGAGAGACTACCAAAACCTGTCCaataaaatgttttgctacatTTTGCAGAAATGAAATAGACCCATGTCTGGCCTGCAGAGCTCCTGAATCATGCTGTGGTCATATCTCCCTATGCACTGCTATCCCCTCCAGCACTAAGTGTAAGGTTAGGTAAACTACGCTCCTGTGTGATTAAGTAGGAGTGTATTGGTTTAGGTTATCTAAACATAGACAGGCTGACAGGTTCATGAagtgtgtggagggggagatgACATGGGACTCCAACACACCAGAATCTCAGAGAGACTCTACATTCACATTCATTTCAATAGGATGGAATTATGTCGTTAATCACAAATGATTTGTGATAATTTATACATTCAATGGCCCTGTACATATAGACAatgcaactactgctgctactactgttactgttactgttgctatttctactactactactactactgttactgttgctatttctactactactactactactactactgttactgctgctatttGTAgttctactactgttactgttactgctgctatttctactactactactactactactgttactgttactgttgctatttctactactactgttactgttactgtcgctatttctactactactactgttactgttgctatttctactactactactactactactactgttgctatttctactactactactactgttactgttgctatttctactactactactactactgttactgttgctatttctactactactactact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU766353 True 1096 lncRNA 0.39 4 10968563 10972832

Neighbor

gene id symbol gene type direction distance location
mrpl19 mrpl19 coding downstream 36100 10921591 ~ 10932463 (-)
mycn LOC106571147 coding downstream 175696 10786206 ~ 10792867 (-)
LOC110529351 LOC106571138 coding downstream 735600 10218620 ~ 10232963 (-)
LOC110529349 NA coding downstream 756019 10194850 ~ 10212544 (-)
LOC110529348 LOC106571135 coding downstream 777451 10152795 ~ 10191112 (-)
LOC110529363 tram2 coding upstream 175276 11148108 ~ 11162069 (-)
LOC110529362 LOC106571157 coding upstream 189602 11162434 ~ 11184353 (-)
LOC110529181 LOC106571156 coding upstream 212905 11185737 ~ 11210434 (-)
LOC110529367 LOC105021682 coding upstream 382513 11355345 ~ 11520698 (-)
LOC118965492 LOC106560407 coding upstream 774223 11747055 ~ 11764400 (-)
G672728 NA non-coding downstream 37755 10929872 ~ 10930808 (-)
G672660 NA non-coding downstream 170082 10797693 ~ 10798481 (-)
G672639 NA non-coding downstream 221881 10746412 ~ 10746682 (-)
G672429 NA non-coding downstream 238962 10729386 ~ 10729601 (-)
G672426 NA non-coding downstream 239897 10728464 ~ 10728666 (-)
G672810 NA non-coding upstream 100562 11073394 ~ 11074025 (-)
G672832 eva1a non-coding upstream 154410 11127242 ~ 11129081 (-)
G672831 NA non-coding upstream 156484 11129316 ~ 11130400 (-)
G672845 NA non-coding upstream 171909 11144741 ~ 11144988 (-)
G672846 NA non-coding upstream 173801 11146633 ~ 11146897 (-)
G672436 LOC107575789 other downstream 229877 10738224 ~ 10738686 (-)
G671820 NA other downstream 846590 10034772 ~ 10121973 (-)
kif26aa LOC106571127 other downstream 995751 9825982 ~ 10013023 (-)
G671122 NA other downstream 1620684 9346384 ~ 9347879 (-)
G670905 NA other downstream 1703470 9263850 ~ 9265093 (-)
G673053 NA other upstream 371641 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 1012002 11984834 ~ 11997491 (-)
G673863 NA other upstream 1045784 12018616 ~ 12025742 (-)
G673867 NA other upstream 1167538 12140370 ~ 12141994 (-)
G674015 NA other upstream 1311005 12283837 ~ 12284220 (-)

Expression


Co-expression Network