G690280


Basic Information

Item Value
gene id G690280
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26162614 ~ 26166381 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU785932
ACTTTGTTCAGAGACTTACTGCTAGCCATGTTAGCCATGGTGGCGTCTAGGTCCCCTCCCATATGTTTAACTGGAGATGAGGCGGCCCCAGTCTGGGGCGTCATGGCAGGCATCATCACATCCCCTAGACCATCAAACGCTACAGGAgacacatggggggggggggagagagagagagagagagagagagagagagagagaggtgagaaacaGCCACAATAATCCTCTCTGATCATAACAGAGGGGTCCTCCTTACGAGTGGGATTACCATGACAACCCATCGAGATGGTCTCCATGACAACAGTGATCAGAGAGGAGCACAACATTGGAATGTTAACAAGAGGCAAGTTCTCATACTGATACTCAGTATGACTGAGGGCTTATACTgtgcctcaacacacacacacacacagtttaagtGATACTCTCCATGTAATATAAATCAACAGCAAAAATATGCTGTCTACTCAACTCTACTAAATAGTATTACTATCCTATTAGCTAGCTTGTTTGAGATGGGGCATCATCCTTTGTATCTTGGTGACAGTAAGGATGCAGCCACCACTCTAGAGGGAGGAAACAGTGCCAAGCTAAATGGGCATTGTGATGTGAGCATCTCACACACCCTATTTATCAGGCATCTGTCAGAGCAGAGGGAAAATAACAGCAGCAGTCGCTCTCTTACTGCAATGCAGCAATGCACTGTGGGAAACAGCGCATCAATGAGCCAGAACACTCACCCAATCAGAGAGCAGGAAGCAAGCAATGAGCCAGCCCCAGagccagatggagagagagaggagcaatagagggacgagagagaaagagagaaatggaacgtgagagaggacaaagagtgtgagagagagcgcgTAAGTGAGTGAGATAAAgtgcagagggaaagagagagaacagagggagggagggaaagagggagaggatgtAAGGGTAAGAAGAAAGGGACAGAAGGACAGTAGTGGAGGGAAAAATAATGGAGTGAGTTAAGAGATGATAAATgttgcgagagaaagagagatggaggagagagagagagagagttaaggctTAAGCAGTAGTACTTGCAGGTCGTCATTTACATAACATGCAGGGCAGTGACAGCCTTGATCATAAACCTGGTAAGCACAGGGAACGTTGCCACgataaaatgtgaaaaagtcaacCAATGCACgcatcaacagagagagacaactatGGAAAGAATCTAGAATGAAAATGACCATACACAACTGCATGTGCATTGGCCATAAAACCAAGGTATGTTCACAAGATACATACACTCAGGATGTATTCATTCAGACAGACatgttcatatacagtaccagtcaaaagtttggacacacctactcattcaagagtttctttatttttactattttatacattgtagaataatagtgaagacatcaaaactatgaaataacacatggaatcaggtagtaaccaaaaaaagtgttaaaacaaatcaaaatatattttatacttgaaattcttcacagtagccacactttgccttgatgacagctttgcacactcttgatgacagctttgcacactcttgatgacagctttgcacactcttgatgacagctttgcacactcttggaattctctcaaccagcttcatgaggaatatattttcaacggtcttgaaggacttcccacatatgctgagcacttcttggctgcttCACTTTGTGGTCcaactcaattgggttgaggttgggtgattgtggaggccaggtcatctgatgcagcactccatcactctcccatcttggtcaaacagcccttacctgccctccaggacacctacaacacccgatgtcacaggagggCAAAAAATATAATTAAGGTCATTAACCACcgaagccactgcctgttcaccctgcttccatccagaaggcgaggtcagtacaggtgcatcaaagctgggacagagagatagaagctgtttttcaatctcaaggccatcagattgtttaacagccatcactagcacagagaggcggatgcttacctacagacttgatatcattggccactttaataaatggaacacaagtcactttaataatggcactttaagaatgtttacgtatcttgcattacttatctcatatgtacagttgaagtcggaagtttacatacacttaggttggagtcattaaaacttatttcttgtttacaaactataggtttggcaagtcggttaggacatctactttgtgcatgacacaagtcatttttccaacaattgtttacagagagattatttcacttataattcactgtatcacaattccagtgggtgagaagtttacatacactaagttgactgtgactttaaacagcttggaaaattccaggaatgatgtcatggctttagaagcttctgataggctaattgacatcctttaagtcaattggaggtgtacctgtggatgtatttcaaggcctacctttaaactcagtgcttcttttgcttgacatcatgggaaaatcaaaagaaatcagccaagacctcagaaaataaattgtagacctccacaagcctggttcatccttgggagcaatttccaaatgcctgaaggtaccacgttcatctgtacaaacaacacagcctggaggtgtgttttgggttattgttctgttgaaaaacaaatgatagtcccactatgcgcaaaccacatgggatggcgtatcgctgcagaatactgtggtagccatcctagttaagtgtgccttgaattttaaataaatcactgacagtgtcaccagcaaagcacccccacaccacctcctctgtgcttcacggttttaaccacacatgaggagatcatcctttcacctactctgcgcctcacaaagacacggcggttagaaccaaaaatctcaaatttggcctCACCAGatcaaatgacagatttccaccggtctaatgtctgtTGCTCGTGACCCAAGCAAgtattttcttcttattggtgtcctttagtagtggtttctttgcagcaactcaaccatgaaggcctgattcacagtctcctctgagcagttAATGTTGATAtctgtgttacttgaactctgaaacatttatttgggctgcaatttatgaggctggtaacgctaatgaacttattctccacagcagaggtaactctgggtcttcctttcctgtggcggtcctcatgagagccagtttcatcatagcgcttgatggttttgcggctgcacttgaagaaactttcaaagttcttgacattttctgtattgactgaccttcaggtcttaaagtaatgaaggactgtcatttctctttgcttatttcagctgttcatgccataatatggacttggtcttttaccaaatagggctatcttctgtataccacccctacctagtTACAACATAACCgcttggctcaaatgcattaagaaggaaagaaattccacaaattaacttttaacaaggcacacctgtcaattgaaatgcattccaggtgactaccttatgaagctggttgagagaatgcaaagagtgtgcaaagctgtcatcaaggcaaagggtggctacttaaagaatctaaaatacatttagttttgttttacactatttttggttactacatgattccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatatatataaagaattATATATAATTACTATATTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU785932 True 3734 lncRNA 0.42 2 26162614 26166381

Neighbor

gene id symbol gene type direction distance location
LOC110531082 pgm3 coding downstream 40334 26120465 ~ 26122280 (-)
LOC110529700 LOC106571487 coding downstream 55813 26094941 ~ 26106801 (-)
LOC110529220 LOC106571486 coding downstream 68005 26087446 ~ 26094609 (-)
LOC110529219 NA coding downstream 144832 26006882 ~ 26017782 (-)
LOC110529697 NA coding downstream 163929 25992424 ~ 25998685 (-)
LOC110529703 LOC106571490 coding upstream 6065 26172446 ~ 26175639 (-)
LOC110529708 LOC106571496 coding upstream 256114 26422495 ~ 26426074 (-)
cenpw LOC106571497 coding upstream 262659 26428702 ~ 26430888 (-)
LOC110529710 LOC106571501 coding upstream 277736 26444117 ~ 26463361 (-)
LOC110529713 l3hypdh coding upstream 425149 26591530 ~ 26596738 (-)
G690237 NA non-coding downstream 89472 26072870 ~ 26073142 (-)
G690231 NA non-coding downstream 99513 26062874 ~ 26063101 (-)
G690219 NA non-coding downstream 126841 26035519 ~ 26035773 (-)
G690115 NA non-coding downstream 139830 26022582 ~ 26022784 (-)
G690112 NA non-coding downstream 142366 26020049 ~ 26020248 (-)
G690691 NA non-coding upstream 73381 26239762 ~ 26240225 (-)
G690692 NA non-coding upstream 74250 26240631 ~ 26240834 (-)
G690693 NA non-coding upstream 75542 26241923 ~ 26242172 (-)
G690697 NA non-coding upstream 78129 26244510 ~ 26244983 (-)
G690696 LOC106613431 non-coding upstream 79946 26246327 ~ 26250741 (-)
G690073 NA other downstream 171471 25990678 ~ 25991143 (-)
G690033 NA other downstream 197121 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 357139 25801320 ~ 25805570 (-)
G689810 LOC106571475 other downstream 497949 25664165 ~ 25664665 (-)
G689723 rad51 other downstream 641326 25517566 ~ 25521288 (-)
G691447 LOC106571509 other upstream 697829 26864210 ~ 26868078 (-)
G691747 NA other upstream 1149187 27315568 ~ 27315935 (-)
G692859 NA other upstream 1949355 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 2312436 28478817 ~ 28481944 (-)

Expression


Co-expression Network