G691520


Basic Information

Item Value
gene id G691520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26995283 ~ 26997833 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU787309
GGGGAATTGTTTTTATTGTGCACATTTACAGGACAGGATGTGTAAGTACTGCATCCTTAACGCTTACAGAACCCCCACGAGTCAATGAGTCTTCATACAGCAGACAGTCAAACATACTCATCTCAGTATTTACAGAGATTATTAGGGTAAAGCTCTTTTCCGGCCTTGCCGGGCAAGGTACAAATCTCATCTCACAGAACTGGAAACAAGGTCAGGCAGGGAAAGTAGGGGTAATACAACAAAAGAATACCTTAGTGTTATGTAAATGTCATTCTGCTTGAATGGCCACACCCATCAGATTTGTAAGAGCGTGGGTTTGATCAAGTGCTCAATTATAACACTTTCACACGCGCCTGAAGTGAAGTGGTGAGGACCCCCCCTGATCATGACTCTATGGTGAGTGAGGCCTGacgtatctcacacacacacacacacacacgtttgcccGAAGGAGAGCTCCTTCACTGCACGAAAGCAAACGCATAGGACACTGCATCCCTGTTCATCACATACGCCACTTTCTATCTCAAATCTCAATCTATATTGGCAACGGTTGGACACATCTCTTTGGAGGAGCTGACAAGTTGAGTGAAGCTTTAAAAGTTTTTGTAAAATAAAGTGTGTTTTTGCTGATAACTTCTATGACTAAAGCAGGGCACTTAACGTGACAAATTTTAAATAGTTAAAAAGGGTATGTTATGATAGCATGGCCCTGACGGCGCAAGAAAATTAGGGGATGAGTACTTTATTCCGTgagaagataaaaaaaaaaagttttatctTGTTTGGGAAATTTCAATAATCCAATACACTTTACTAACGAAGAGTACTTTACCTGGGACTAAAATCCAGGAACATATGTTGAGAAATAGGTTATTTTCcataagttaaaaaaaataaggcctttttgttttgtcatgtgGAAGGGCAGTGTCAAATCCCTAAATAATCTCTATCATTTGAGAAGGAAAAGAAGCTGATGGAAAAGTAAGTTAGGACAGTTAAAATTCTGGCTTATTTGGAAGCTACTTAGCAAGCGACCTACAGAATTGATATAGGTACTCTTTGTTCATATCGATAGAGGGAAATGTAAAATCCCTGTTATGATTGTACATAACATTCAGAATCTGGCACACCATTGTACAGACCTCAAACTGTCACCCCTCTTCACAGCAAACACAAATTCTTGACCTGTTAAACTCATCATACATAACCTTTCAGTCATGTGCACATTCAGATAGTAGGCCTAGTTGGACAAGGCAGATTGTAACCAAATCCAGCCATGATTTACCATACAGGCTATAAAGCCTTGGCTACAGATGAAACAATTTAGGCATTCAGCTCTTTCTCCCATCATAAACTTGGGATGGGGATAAATAACAGTGACTCCCTTGAAGGGGGAGAATCTGAGATTTCCAACAATGCCAGAAATATTACTGTACTCCTAATATTAAGCAAATGGCATTCATATTTTCCATTTAAAAAACTGCACTCGTATTAGTGGGCCGTGAGAGCAGCAACACAGATGAATAGTAGCACACATGGGAAAATCTTTTCTGATCTGATCAAAGCAAAAATAGCCTACATTGTTTCTAGTTTAGGTTAGTTACAATTGAAGTGTCCTGAGCATCAGTTCAAAAGATACACAAGTGACTGAAGTGACCGCCGGGAGCTGTGAGGGAGAGCCGGGCAGATCAGCTCAATCAGACCCTGCAACTGAAAGACGTTAATTTAGCCAATGAGAGGATTGCATTCAATATTCTGCAAAGGCATGCATGCTTATGATTGGACAAAACAGACTAAAGGGAGCTTCATGTCAAATTGAATGTTCATTAGTCACGTTTTCATCAActaaaaagaaaacaaaatggtTAGTTATTGTTTTTTTCATGGCATCTCACTATCATCATTAGTTTTTGTCAGGAAAAATAGCTGGACTATTATTTTGTCATAGTTATTGACTAAATTAACACTGGTACACATACACCATCCACATGTCACACATACCTATTGTACACATTCAAGcaccctctctctagtccttAAACCCACACACTTTCCAAACACACAAGGCCCTCTaaactattcacacacacacacacacacacacacacacggatttaAATAAAGCTGAAAGGAGATAGTGAGAGAGCAGAGTGGGGTTTGGTCAACCGAAAAGGGGTAGCAGAGGGATCCTGTCTTTtctggggtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtgttgaaCACTGTCCGGTGTCCCATAGCCAGGGTTACAGGGAGGAGGGGGAAACTGTGGCAGTAGGGGAGCACCAGGCCTCCCCACTCCGCCAGTCTTCGGCCACGCCTGCCTGTAGTCCAGTTTTTCACCCAAGGAAGAGGCAGAGGGGTTAAGCCAGGGAGCGCTGACGAGGTTTTATCCTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU787309 True 2436 lncRNA 0.42 2 26995283 26997833

Neighbor

gene id symbol gene type direction distance location
LOC110529714 LOC106571503 coding downstream 392349 26599030 ~ 26602934 (-)
LOC110529713 l3hypdh coding downstream 398545 26591530 ~ 26596738 (-)
LOC110529710 LOC106571501 coding downstream 531922 26444117 ~ 26463361 (-)
cenpw LOC106571497 coding downstream 564395 26428702 ~ 26430888 (-)
LOC110529708 LOC106571496 coding downstream 569209 26422495 ~ 26426074 (-)
LOC110529723 NA coding upstream 173105 27170938 ~ 27186859 (-)
esr2a erb1 coding upstream 246726 27244559 ~ 27284491 (-)
LOC110529724 NA coding upstream 289282 27287115 ~ 27308032 (-)
LOC110529221 NA coding upstream 617167 27615000 ~ 27616094 (-)
brf1b LOC106571710 coding upstream 826317 27824150 ~ 27951450 (-)
G691505 NA non-coding downstream 42737 26950717 ~ 26952546 (-)
G691479 NA non-coding downstream 85390 26908013 ~ 26909893 (-)
G691473 NA non-coding downstream 92597 26902457 ~ 26902686 (-)
G691471 NA non-coding downstream 95894 26899142 ~ 26899389 (-)
G691469 NA non-coding downstream 98524 26896533 ~ 26896759 (-)
G691671 NA non-coding upstream 181351 27179184 ~ 27214300 (-)
G691742 NA non-coding upstream 299810 27297643 ~ 27298144 (-)
G691749 NA non-coding upstream 321580 27319413 ~ 27319655 (-)
G691755 NA non-coding upstream 330985 27328818 ~ 27329410 (-)
G691807 NA non-coding upstream 410698 27408531 ~ 27410226 (-)
G691447 LOC106571509 other downstream 127205 26864210 ~ 26868078 (-)
G690073 NA other downstream 1004140 25990678 ~ 25991143 (-)
G690033 NA other downstream 1029790 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 1189808 25801320 ~ 25805570 (-)
G691747 NA other upstream 317735 27315568 ~ 27315935 (-)
G692859 NA other upstream 1117903 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 1480984 28478817 ~ 28481944 (-)
G693383 btbd7 other upstream 1595508 28593341 ~ 28594431 (-)
G693665 NA other upstream 1960562 28958395 ~ 28958832 (-)

Expression


Co-expression Network