G692769 (LOC106571703)


Basic Information

Item Value
gene id G692769
gene name LOC106571703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28032403 ~ 28036080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU788641
gctcaagggcacaacggcaaaATAATCTGATACCAGGAACTCTTCGGTTACTGGTTTGTTTCCTCCTCTAgcctgggatttgaacccaccACCACCCTCCCACTTACTGGTCTGCATCTCTATTCTCTAGGGCTAAATACCTGGGATCCTTAGGTGGTCGAGAGCATTCAGACTCAGGCCCTGAAGGAGTTGCTCGCGTGTAGAGCCATCGGCGCCACTCATCAATGCAGCTAAACCCAGAGATACGGTGAATGGGGAGAGAAGGACGTTGTCATCAGTGGTGCTAGCAATGGCACGGTACAGCCGGGCGGCAAAGTCAGCATTTCTGGTGCTCAGGTCCTGGATTTCCCCAGCGCTGGGCTCCTGTGCCAAAAGTGGCATGGCGAGGAGTGGGATGCACGCCAGGAGGGGGAGGAGTCTGGACGTCATGGTTCTTCCTCCGCTTTTCTTTTTGCACTAAAAAGCCTGCCTGGAAATTGATCAGGATAACGTCACAGATAACAAAAAATACGCCTGTGAAGACCTCTGTTCCGCAGGCAGGAATTAACAAAACCGAGCAAGAATAAGGCCATGAACTCAGC
>TU788642
atttgccatttagcagacgcttttatccaaaacaACTTTTTTGCGTATGGGTGTTCCAGGTAATCGAACCCATTACCCTGGAGTTGCAAGCACCATGTTCTACTGAACCCCTGTGCCTACTCCTCACCTTGAAAGAAAATGGCAGTGATTAGCATCATCTGGGTCTGGGGGTCGATGGCGCTGACCACCTCCTTCACCTGCTCCCTGGTGTAGGTGTAGAAAAACTGGTTGATGGTGTCCTTGGCAGCCCCGTCGCTATAGTCCAGCCCCTGGACATTTCCTCCATACTTGGTCTGCACAAAGTCTCGGTAGGTCGAGTCCACTTTGAACTGCTGGCGGGGAAGGATGCCGATACCCTGGTTCACAAACCCACTCTGGGCCATGCTATCCCGGACACTCTGGAACAGTTCTGGATCCTTAGGTGGTCGAGAGCATTCAGACTCAGGCCCTGAAGGAGTTGCTCGCGTGTAGAGCCATCGGCGCCACTCATCAATGCAGCTAAACCCAGAGATACGGTGAATGGGGAGAGAAGGACGTTGTCATCAGTGGTGCTAGCAATGGCACGGTACAGCCGGGCGGCAAAGTCAGCATTTCTGGTGCTCAGGTCCTGGATTTCCCCAGCGCTGGGCTCCTGTGCCAAAAGTGGCATGGCGAGGAGTGGGATGCACGCCAGGAGGGGGAGGAGTCTGGACGTCATGGTTCTTCCTCCGCTTTTCTCAGCTTTTTGCACTAAAAAGCCTGCCTGGAAATTGATCAGGATAACGTCACAGATAACAAAAAATACGCCTGTGAAGACCTCTGTTCCGCAGGCAGGAATTAACAAAACCGAGCAAGAATAAGGCCATGAACTCAGC
>TU788643
atttgccatttagcagacgcttttatccaaaacaACTTTTTTGCGTATGGGTGTTCCAGGTAATCGAACCCATTACCCTGGAGTTGCAAGCACCATGTTCTACTGAACCCCTGTGCCTACTCCTCACCTTGAAAGAAAATGGCAGTGATTAGCATCATCTGGGTCTGGGGGTCGATGGCGCTGACCACCTCCTTCACCTGCTCCCTGGTGTAGGTGTAGAAAAACTGGTTGATGGTGTCCTTGGCAGCCCCGTCGCTATAGTCCAGCCCCTGGACATTTCCTCCATACTTGGTCTGCACAAAGTCTCGGTAGGTCGAGTCCACTTTGAACTGCTGGCGGGGAAGGATGCCGATACCCTGGTTCACAAACCCACTCTGGGCCATGCTATCCCGGACACTCTGGAACAGTTCTGGATCCTTAGGTGGTCGAGAGCATTCAGACTCAGGCCCTGAAGGAGTTGCTCGCGTGTAGAGCCATCGGCGCCACTCATCAATGCAGCTAAACCCAGAGATACGGTGAATGGGGAGAGAAGGACGTTGTCATCAGTGGTGCTAGCAATGGCACGGTACAGCCGGGCGGCAAAGTCAGCATTTCTGGTGCTCAGGTCCTGGATTTCCCCAGCGCTGGGCTCCTGTGCCAAAAGTGGCATGGCGAGGAGTGGGATGCACGCCAGGAGGGGGAGGAGTCTGGACGTCATGGTTCTTCCTCCGCTTTTCTCAGCTCGCATTTTGCACTAAAAAGCCTGCCTGGAAATTGATCAGGATAACGTCACAGATAACAAAAAATACGCCTGTGAAGACCTCTGTTCCGCAGGCAGGAATTAACAAAACCGAGCAAGAATAAGGCCATGAACTCAGC
>TU788644
atttgccatttagcagacgcttttatccaaaacaACTTTTTTGCGTATGGGTGTTCCAGGTAATCGAACCCATTACCCTGGAGTTGCAAGCACCATGTTCTACTGAACCCCTGTGCCTACTCCTCACCTTGAAAGAAAATGGCAGTGATTAGCATCATCTGGGTCTGGGGGTCGATGGCGCTGACCACCTCCTTCACCTGCTCCCTGGTGTAGGTGTAGAAAAACTGGTTGATGGTGTCCTTGGCAGCCCCGTCGCTATAGTCCAGCCCCTGGACATTTCCTCCATACTTGGTCTGCACAAAGTCTCGGTAGGTCGAGTCCACTTTGAACTGCTGGCGGGGAAGGATGCCGATACCCTGGTTCACAAACCCACTCTGGGCCATGCTATCCCGGACACTCTGGAACAGTTGGGATCCTTAGGTGGTCGAGAGCATTCAGACTCAGGCCCTGAAGGAGTTGCTCGCGTGTAGAGCCATCGGCGCCACTCATCAATGCAGCTAAACCCAGAGATACGGTGAATGGGGAGAGAAGGACGTTGTCATCAGTGGTGCTAGCAATGGCACGGTACAGCCGGGCGGCAAAGTCAGCATTTCTGGTGCTCAGGTCCTGGATTTCCCCAGCGCTGGGCTCCTGTGCCAAAAGTGGCATGGCGAGGAGTGGGATGCACGCCAGGAGGGGGAGGAGTCTGGACGTCATGGTTCTTCCTCCGCTTTTCTCAGCTCGCAATGGAaacaaaatatacatgttttaAGCAAAGTGTCCTCAGCAAGTTAAGTTCAACACTAACACATAAACATTTAATTAGTCTAGCGTTAAAGGTATAGTACACTCCAAAATCAAAGATTGCCTGACATTTTCATACAAAACAAATGGTCTAAAATTGAGCTGAGAAATATCTGAAAATGTTTGATTTTGGGGTCCACTATCTTTTTAATATTTATGTAATTATGTACGATATGTAATAGGCTATTAAAATTACAATATGTTATTAGGACAGTAGCTTCGGGACCGCAACTAGgatcctgtatatagtatgggaTCCTAGTTGCGCATCATTATGTCGTCCGAAATTCATTACAGCCCTAAAGTGTTCTGTTAATAAAAAAATTATTCCACAAAATAAGGTCACTAATCTAAAAAAACTGTCAGTGTCCAGAGTAGCTGAGTAAACTCCACTTCATAAATCTCAATGGAGTTGACATGCGTATCAGTTGATACTTTTTTAATGCGTACCTTGTACCTAAGTCTGTCCTGTTTAACTGCATTATTTTCTTTGGGTGCTGAAATCCTTCATTTTTCTTCAAAGGTCTGTGGCACTGTGAAAGACATGGGCATGGGCGTGGCTGAACGACTCCCAGTGCATCACTATGGACAGCGGCACTGGCTGCAGCACAGTGAACAGTGGCACTCAGTgcagccttccacattgctaaaCTATCTTCAGCACCAGGCCAGCCAAAGACTGCGCCACAGCTATGCTCACCCAACACACCTGTGCAGGATTACTAAATCAGCACACCTGCAAGGCATTCCCTAATCAACTGACTGGCACAAGACTGCAGGCTGGACCTCGCTCAAGTGGAGCAGTTAGGAAGACTGCCAGAGCGTGCCTACACTCCCACTTCTGTAGTTGGGCACACCTCACTCTTCC

Function

NR:

description
protein Z-dependent protease inhibitor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU788641 False 581 lncRNA 0.52 2 28032403 28035533
TU788642 False 854 lncRNA 0.53 3 28032403 28036080
TU788643 False 858 lncRNA 0.53 3 28032403 28036080
TU788644 True 1651 lncRNA 0.47 3 28034092 28036080

Neighbor

gene id symbol gene type direction distance location
LOC110529732 LOC106571705 coding downstream 8478 28011797 ~ 28023925 (-)
brf1b LOC106571710 coding downstream 80953 27824150 ~ 27951450 (-)
LOC110529221 NA coding downstream 416309 27615000 ~ 27616094 (-)
LOC110529724 NA coding downstream 724371 27287115 ~ 27308032 (-)
esr2a erb1 coding downstream 747912 27244559 ~ 27284491 (-)
ppp4r4 ppp4r4 coding upstream 14079 28050159 ~ 28177674 (-)
prima1 prima1 coding upstream 290856 28326936 ~ 28388304 (-)
si:dkey-85n7.8 NA coding upstream 442737 28478817 ~ 28481944 (-)
ubr7 ubr7 coding upstream 570191 28606271 ~ 28624188 (-)
tmem251 tmem251 coding upstream 589332 28625412 ~ 28635685 (-)
G692725 NA non-coding downstream 176752 27855393 ~ 27855651 (-)
G692722 NA non-coding downstream 181652 27850510 ~ 27850751 (-)
G692687 NA non-coding downstream 187577 27800216 ~ 27844826 (-)
G692169 NA non-coding downstream 310200 27717179 ~ 27722203 (-)
G692153 NA non-coding downstream 346693 27685318 ~ 27685710 (-)
G692832 NA non-coding upstream 35908 28071988 ~ 28105978 (-)
G692856 NA non-coding upstream 74485 28110565 ~ 28110782 (-)
G692864 NA non-coding upstream 88337 28124417 ~ 28124648 (-)
G692879 NA non-coding upstream 114697 28150777 ~ 28151092 (-)
G692909 NA non-coding upstream 160075 28196155 ~ 28196531 (-)
G691747 NA other downstream 716468 27315568 ~ 27315935 (-)
G691447 LOC106571509 other downstream 1164325 26864210 ~ 26868078 (-)
cenpw LOC106571497 other downstream 1601560 26428702 ~ 26430888 (-)
G690073 NA other downstream 2041260 25990678 ~ 25991143 (-)
G690033 NA other downstream 2066910 25965179 ~ 25965493 (-)
G692859 NA other upstream 79656 28115736 ~ 28116048 (-)
G693383 btbd7 other upstream 557261 28593341 ~ 28594431 (-)
G693665 NA other upstream 922315 28958395 ~ 28958832 (-)
G694858 LOC105017690 other upstream 1965683 30001763 ~ 30062168 (-)

Expression


Co-expression Network