G693527


Basic Information

Item Value
gene id G693527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28882303 ~ 28882931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU789450
ctccactgtaGCCCCGTTGAGGCCTATCACCGTCGCGTCGTCAATTAATTATTGATTGCATGCTGGTGTTGTAGGCCTAGGTAGGATAATTGTATTGTCCCTGAACAAGATCAATAGGGGAGCTTTTGAGCTGTGTGtttcatgtcttcactgttctttcatgCACAATGATGCACCTGGCCTCTTCGCTTATATAGAAAATATGTGCAGCTTTGAATGATTTTATGTGCGGTATGATTGCTAGTTAGCCTATTGCAGATGTGGACAAATGATCCACCTATCACTATTGTCgctatgaatggtggatagaggtcaggatagacagacaggtagactatattgacctgtggtatagtTACACGGAACCctaaccggctgcgcgcgtgcccCATCGTGCATACGGTTATTTTGtacccccacaccaaacgcgatcacgacacgcaggttaaaatatcaaaacaaactctgaaccaattacattaatttggggacaggtcgaaaagcattaaacatgtatgacaatttagctagctagcttgcacatgctagctaatttgtcctatttagctagcttgctgttgctagctaatttgtcctgatatatataaacattgagttgttattttacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU789450 True 629 lncRNA 0.42 1 28882303 28882931

Neighbor

gene id symbol gene type direction distance location
ahsa1a LOC106571686 coding downstream 22192 28850874 ~ 28860111 (-)
LOC110529750 LOC106571688 coding downstream 37476 28822703 ~ 28844827 (-)
si:dkey-177p2.18 LOC106571734 coding downstream 77946 28776437 ~ 28804357 (-)
LOC110529748 NA coding downstream 115630 28736794 ~ 28766673 (-)
chga chga coding downstream 154392 28704849 ~ 28727911 (-)
LOC110529757 LOC106571682 coding upstream 107326 28990257 ~ 29005160 (-)
lcb2 lcb2 coding upstream 142352 29025283 ~ 29029716 (-)
LOC110529223 snw1 coding upstream 163492 29046423 ~ 29096035 (-)
LOC118965622 NA coding upstream 319455 29202386 ~ 29203480 (-)
LOC118965623 NA coding upstream 321219 29204150 ~ 29208928 (-)
G693517 vipas39 non-coding downstream 6190 28873318 ~ 28876113 (-)
G693488 NA non-coding downstream 96787 28785109 ~ 28785516 (-)
G693471 NA non-coding downstream 112091 28770001 ~ 28770212 (-)
G693468 NA non-coding downstream 114147 28767751 ~ 28768156 (-)
G693390 itpk1 non-coding downstream 216369 28634023 ~ 28665934 (-)
G693528 NA non-coding upstream 693 28883624 ~ 28884010 (-)
G693530 NA non-coding upstream 3503 28886434 ~ 28886754 (-)
G693652 NA non-coding upstream 58931 28941862 ~ 28942115 (-)
G693653 NA non-coding upstream 59329 28942260 ~ 28943003 (-)
G693654 NA non-coding upstream 60100 28943031 ~ 28943266 (-)
G693383 btbd7 other downstream 287872 28593341 ~ 28594431 (-)
si:dkey-85n7.8 NA other downstream 400405 28478817 ~ 28481944 (-)
G692859 NA other downstream 766255 28115736 ~ 28116048 (-)
G691747 NA other downstream 1566368 27315568 ~ 27315935 (-)
G691447 LOC106571509 other downstream 2014225 26864210 ~ 26868078 (-)
G693665 NA other upstream 75464 28958395 ~ 28958832 (-)
G694858 LOC105017690 other upstream 1118832 30001763 ~ 30062168 (-)
G696068 NA other upstream 1963971 30846902 ~ 30847209 (-)
G696073 NA other upstream 1972176 30855107 ~ 30855407 (-)
G696499 NA other upstream 2594423 31477354 ~ 31478027 (-)

Expression


Co-expression Network