Gene
RNA
| Item | Value |
|---|---|
| gene id | G693528 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 28883624 ~ 28884010 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU789451 | True | 387 | lncRNA | 0.41 | 1 | 28883624 | 28884010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ahsa1a | LOC106571686 | coding | downstream | 23513 | 28850874 ~ 28860111 (-) |
| LOC110529750 | LOC106571688 | coding | downstream | 38797 | 28822703 ~ 28844827 (-) |
| si:dkey-177p2.18 | LOC106571734 | coding | downstream | 79267 | 28776437 ~ 28804357 (-) |
| LOC110529748 | NA | coding | downstream | 116951 | 28736794 ~ 28766673 (-) |
| chga | chga | coding | downstream | 155713 | 28704849 ~ 28727911 (-) |
| LOC110529757 | LOC106571682 | coding | upstream | 106247 | 28990257 ~ 29005160 (-) |
| lcb2 | lcb2 | coding | upstream | 141273 | 29025283 ~ 29029716 (-) |
| LOC110529223 | snw1 | coding | upstream | 162413 | 29046423 ~ 29096035 (-) |
| LOC118965622 | NA | coding | upstream | 318376 | 29202386 ~ 29203480 (-) |
| LOC118965623 | NA | coding | upstream | 320140 | 29204150 ~ 29208928 (-) |
| G693527 | NA | non-coding | downstream | 693 | 28882303 ~ 28882931 (-) |
| G693517 | vipas39 | non-coding | downstream | 7511 | 28873318 ~ 28876113 (-) |
| G693488 | NA | non-coding | downstream | 98108 | 28785109 ~ 28785516 (-) |
| G693471 | NA | non-coding | downstream | 113412 | 28770001 ~ 28770212 (-) |
| G693468 | NA | non-coding | downstream | 115468 | 28767751 ~ 28768156 (-) |
| G693530 | NA | non-coding | upstream | 2424 | 28886434 ~ 28886754 (-) |
| G693652 | NA | non-coding | upstream | 57852 | 28941862 ~ 28942115 (-) |
| G693653 | NA | non-coding | upstream | 58250 | 28942260 ~ 28943003 (-) |
| G693654 | NA | non-coding | upstream | 59021 | 28943031 ~ 28943266 (-) |
| G693657 | NA | non-coding | upstream | 60963 | 28944973 ~ 28945203 (-) |
| G693383 | btbd7 | other | downstream | 289193 | 28593341 ~ 28594431 (-) |
| si:dkey-85n7.8 | NA | other | downstream | 401726 | 28478817 ~ 28481944 (-) |
| G692859 | NA | other | downstream | 767576 | 28115736 ~ 28116048 (-) |
| G691747 | NA | other | downstream | 1567689 | 27315568 ~ 27315935 (-) |
| G691447 | LOC106571509 | other | downstream | 2015546 | 26864210 ~ 26868078 (-) |
| G693665 | NA | other | upstream | 74385 | 28958395 ~ 28958832 (-) |
| G694858 | LOC105017690 | other | upstream | 1117753 | 30001763 ~ 30062168 (-) |
| G696068 | NA | other | upstream | 1962892 | 30846902 ~ 30847209 (-) |
| G696073 | NA | other | upstream | 1971097 | 30855107 ~ 30855407 (-) |
| G696499 | NA | other | upstream | 2593344 | 31477354 ~ 31478027 (-) |
