G697561


Basic Information

Item Value
gene id G697561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32159223 ~ 32160048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU793897
TTCTGATGCCATGAGGATACTAAAGTCACCACAAAATCAAagggagagctcgaaaattcaagacCCTTGGGTGCTGttatagagttacattagaaatgCCCATCCTAGAAGGCTAAAGGTCATAAAATGACGTTAAAacacgttatatctaccgtagctttaaTTGTattgatcatgtcaacatcatactttcaaaatcttgaCTAGCaattggtgctcatcggccattggacatgaaCATTAGACAACAAGttgaaaatcgcaaattcaacaatgaatgGTTTGGAAGAAATCAGTGTCTAACTGAaaacattgcaaagcaatcagtttgggtttaagggtctcttttccaagcttaaaatgataaacatttaaCATTGGACATACTGTCAATCCAGTGGCCaatggcctctttctagagctccgacctgaagattaCTGACATCATGATTCAGTATAGTTTTTTTCTTCagatttcccagttgtcttgaaagcgccATCAATCCAGAGAATGGTAGACATTGATGAAGGGTAGACATTGATGAACCtttctgttcaagtgagcacagcacaacacggcaagtccaaaaatgtattgtatgctgctgcataaattatgtaatatgccagggagatttGTAtaatgtagctaagaaagtaacactaagtgtatgttgtgtagtaagctgtttgtagcccatgtgcctcatccTAAAAATGTGGTCCCTTTCctcctcataacttagcctactgttctgacttggtggcgcacatgtagcctatagcctgttttagagaaatgccaTCATCAAATATTATAAGAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU793897 True 826 lncRNA 0.38 1 32159223 32160048

Neighbor

gene id symbol gene type direction distance location
LOC110529796 LOC106571727 coding downstream 24029 32132683 ~ 32135194 (-)
LOC110529793 LOC106571728 coding downstream 455698 31657632 ~ 31703525 (-)
LOC110529792 LOC106571729 coding downstream 553032 31602683 ~ 31606191 (-)
LOC110529791 LOC106571644 coding downstream 655233 31486817 ~ 31503990 (-)
LOC110529790 LOC106571645 coding downstream 700976 31453334 ~ 31458247 (-)
LOC110529804 ypel5 coding upstream 54403 32214451 ~ 32217572 (-)
bpnt1 bpnt1 coding upstream 109047 32269095 ~ 32278234 (-)
LOC110529808 LOC106571628 coding upstream 126010 32286058 ~ 32287169 (-)
LOC110529806 LOC106571627 coding upstream 129016 32289064 ~ 32301293 (-)
LOC110529812 LOC106571726 coding upstream 146094 32306142 ~ 32322140 (-)
G697560 NA non-coding downstream 568 32158354 ~ 32158655 (-)
G697559 NA non-coding downstream 1004 32157997 ~ 32158219 (-)
G697555 NA non-coding downstream 9406 32149612 ~ 32149817 (-)
G697544 NA non-coding downstream 33312 32125696 ~ 32125911 (-)
G697541 NA non-coding downstream 38222 32120742 ~ 32121001 (-)
G697604 NA non-coding upstream 64559 32224607 ~ 32224813 (-)
G697632 ppp1cb non-coding upstream 95473 32255521 ~ 32268603 (-)
G697642 NA non-coding upstream 124842 32284890 ~ 32285129 (-)
G697643 NA non-coding upstream 142822 32302870 ~ 32303081 (-)
G697644 NA non-coding upstream 143109 32303157 ~ 32305119 (-)
G696499 NA other downstream 681196 31477354 ~ 31478027 (-)
G696073 NA other downstream 1303816 30855107 ~ 30855407 (-)
G696068 NA other downstream 1312014 30846902 ~ 30847209 (-)
G694858 LOC105017690 other downstream 2097055 30001763 ~ 30062168 (-)
G697774 LOC106571626 other upstream 338751 32498799 ~ 32499410 (-)
G698356 NA other upstream 829197 32989245 ~ 32990061 (-)
G699468 NA other upstream 1782974 33943022 ~ 33952356 (-)
ankef1a LOC106571587 other upstream 1863243 34017010 ~ 34029131 (-)

Expression


Co-expression Network