G699730 (hs90a)


Basic Information

Item Value
gene id G699730
gene name hs90a
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 34171056 ~ 34177610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU796211
ATTGGTTAACATGGTCAACTTTATTTTGGGGTCCCACCATTTCAAGTTACAGTATCAATTTCAGAAAATATTTACAGTCAAGTGAACACACAAAAGAAAGTTGGAAtgtcaataaaaaaaatcatTGATACAACTCAAGATACAAAAAAAGTGTCAACAGGCTCTTGTTTTGTAAACACTAACACTTATGGGAATGAATCTAAACTGCATATGATCAATGCAGGTCAAGGGATTTTGGATCGAGAAGGAGGGCAAGGGGGGAAATTCCAGGTTCATGAACAAACATCAAAGTCATCCTGTCTTAATTTACAACACTACTAGTGTCAAAGCAAACTGgtgtagttacagtaacactgcaGCTGAGTCAGTTGGTCTAGTCAACCTCCTCCATCCTGGATGTGTCCTCGTCTCCCTCCAGGAGAGGCATGTCCTCCACAGGGGCTGAGGTTGGCTCCTCGGGGGTCAGGTCATCCTCGTCAACCCAGTcctagcttgatcattctgtagATGCGGTTGGAGTGTGTCTGAGGGTCATCCAAGGTGAACCCAGAGGACAACAGAGCCGTCTCAAACAGCAGAAGGACTAGGTCCTTCACTGATTTATCATTCTTATCAGCCTCTGCCTTCTGCCTCAGGGTCTCCACAATGGGGTGGTCTGGGTTGATCTCCAGGTGCTTCTTGGCAGCCATGTAGCCCATGGTGGAGTTGTCCCTCAGGGCCTGGGCCTTCATGATCTTGCAGAGGTTCTCAAACTGAGACTTCTGTTCTTCATGCCTCTTCTTCATGTCCTCGTCCTCAGGCAGCTCCAGACCCTCCTTGGTCACAGAGACAAGGGTCTTGCCATCATACTCCTTCAGCTGCTGGACACAGTACTCATCAATAGGCTCAATCATGTAGATTACTTCCAGGCCGGCCTTTCGAAGGCGTTCCACGAATGCAGAGTTAGCCACCTGGTCTCTGGTCTCGGTGATGTAGTAGATATGTTTCTGGGTTTCCTTCATGCGTGTGACGTAGTCTTTGAGGGATACCATCTCGTCCCCTGAGGCTGAGGAGTAGTAGCGCAGCATGTCTGACAGCCTCTTACGGTTCTGAGAGTCCTCATGGATCCCACCTTGATGTTCTTGGAGAACTGCTCGTAGTACTTCTTGTAGTTTTCTTTGTCCTCTGACAGCTCAGTGAAGAGCTCTATACACTTCTTGACCAGGTTCTTGCGGATCACCTTGAGGATCTTGCTCTGCTGCAGCATCTCTCTGGAGATGTTTAGGGGGAGATCCTCAGAGTCCACCACACCCTTGATGAAGTCTGGAGAAAATGACAGAGACAATTGGTCAGACACCTTCAATTAGATTATAGCTCATTCCCAGATCTACGTGAGCATTTGCTTCAGTTCTGTCTGACTCACTGAGGTACTCAGGGATAAGATCATCACAGTTGTCCATGATGAAGACCCTCCTGACGTACAGCTTGAtattgttcttcttcttcttgttttcAAAGAGGTCAAAGGGTGCACGGCGAGGCACAAAGAGCAGGGCACGGAACTCCAGCTGGCCTTCAACTGAGAAGTGCTGTGTAAGTAAACAAACAGAATGCCAACTGCTGAAACCTTAATGTACATGTATATTTGTCGTTCTGAAATTACCTCACCCATTATCAGCTGACTAATACTGGTACTATCTATGACTTCACACATCAGCAAGGGAAACTTAGTAAATAAACAGTGTGGGAACTTATTCTGTTGGCCAATATGAATAGAATATCCTCACCTTGACAGCCAGGTGTTCCTCCCAGTCGTTGGTCAGACTCTTGTAGAACTCTCCATACTCCTCGTTGGTGATGTCATCGGGGTTACGGGTCCACAGGGGCTTGGTCTTGTTCAGCTCCTCCTGGTCAATGTATTTCTCCttgatcttcttcttcttcttcttcttgtcacCGCATGCGCTGTCGTGGTCATGGTCATGGTGATCCTCCTCGTCTGAGCCTACGTCCTCGATCTCAGGTTTGtcaacctctctcttctctccttcttccccatccttcttctcctcttcctcctctgcctCATCGTCACTCACTTCCTTGTCACGCTCCTTCTCCACCTGAACAGAGAGGATCATGAGAATGTTAGGGGACACATTCAATGtgttgatgtactgtagctgACTTTGAGTGGGTAGTTGTCAAAAAATATTTCATTCA
>TU796213
ATTGGTTAACATGGTCAACTTTATTTTGGGGTCCCACCATTTCAAGTTACAGTATCAATTTCAGAAAATATTTACAGTCAAGTGAACACACAAAAGAAAGTTGGAAtgtcaataaaaaaaatcatTGATACAACTCAAGATACAAAAAAAGTGTCAACAGGCTCTTGTTTTGTAAACACTAACACTTATGGGAATGAATCTAAACTGCATATGATCAATGCAGGTCAAGGGATTTTGGATCGAGAAGGAGGGCAAGGGGGGAAATTCCAGGTTCATGAACAAACATCAAAGTCATCCTGTCTTAATTTACAACACTACTAGTGTCAAAGCAAACTGgtgtagttacagtaacactgcaGCTGAGTCAGTTGGTCTAGTCAACCTCCTCCATCCTGGATGTGTCCTCGTCTCCCTCCAGGAGAGGCATGTCCTCCACAGGGGCTGAGGTTGGCTCCTCGGGGGTCAGGTCATCCTCGTCAACCCAGTcctagcttgatcattctgtagATGCGGTTGGAGTGTGTCTGAGGGTCATCCAAGGTGAACCCAGAGGACAACAGAGCCGTCTCAAACAGCAGAAGGACTAGGTCCTTCACTGATTTATCATTCTTATCAGCCTCTGCCTTCTGCCTCAGGGTCTCCACAATGGGGTGGTCTGGGTTGATCTCCAGGTGCTTCTTGGCAGCCATGTAGCCCATGGTGGAGTTGTCCCTCAGGGCCTGGGCCTTCATGATCCTCTCCATGTTGGCCGTCCAGCCATAGGTGCTGGTCACGATGCAGCAGGGGGAGGAGACCAGGCGGTTGGACACTGTCCCTTCTCTACTTTCTTCTCCAAGATGTCCTTCATGATCTTGCAGAGGTTCTCAAACTGAGACTTCTGTTCTTCATGCCTCTTCTTCATGTCCTCGTCCTCAGGCAGCTCCAGACCCTCCTTGGTCACAGAGACAAGGGTCTTGCCATCATACTCCTTCAGCTGCTGGACACAGTACTCATCAATAGGCTCAATCATGTAGATTACTTCCAGGCCGGCCTTTCGAAGGCGTTCCACGAATGCAGAGTTAGCCACCTGGTCTCTGGTCTCGCAGTGATGTAGTAGATATGTTTCTGGGTTTCCTTCATGCGTGTGACGTAGTCTTTGAGGGATACCATCTCGTCCCCTGAGGCTGAGGAGTAGTAGCGCAGCATGTCTGACAGCCTCTTACGGTTCTGAGAGTCCTCATGGATCCCCAGCtgATGTTCTTGGAGAACTGCTCGTAGTACTTCTTGTAGTTTTCTTTGTCCTCTGACAGCTCAGTGAAGAGCTCTATACACTTCTTGACCAGGTTCTTGCGGATCACCTTGAGGATCTTGCTCTGCTGCAGCATCTCTCTGGAGATGTTTAGGGGGAGATCCTCAGAGTCCACCACACCCTTGATGAAGTCTGGAGAAAATGACAGAGACAATTGGTCAGACACCTTCAATTAGATTATAGCTCATTCCCAGATCTACGTGAGCATTTGCTTCAGTTCTGTCTGACTCACTGAGGTACTCAGGGATAAGATCATCACAGTTGTCCATGATGAAGACCCTCCTGACGTACAGCTTGAtattgttcttcttcttcttgttttcAAAGAGGTCAAAGGGTGCACGGCGAGGCACAAAGAGCAGGGCACGGAACTCCAGCTGGCCTTCAACTGAGAAGTGCTTGACAGCCAGGTGTTCCTCCCAGTCGTTGGTCAGACTCTTGTAGAACTCTCCATACTCCTCGTTGGTGATGTCATCGGGGTTACGGGTCCACAGGGGCTTGGTCTTGTTCAGCTCCTCCTGGTCAATGTATTTCTCCttgatcttcttcttcttcttcttcttgtcacCGCATGCGCTGTCGTGGTCATGGTCATGGTGATCCTCCTCGTCTGAGCCTACGTCCTCGATCTCAGGTTTGtcaacctctctcttctctccttcttccccatccttcttctcctcttcctcctctgcctCATCGTCACTCACTTCCTTGTCACGCTCCTTCTCCACCTGAACAGAGAGGATCATGAGAATGTTAGGGGACACATTCAATGtgttgatgtactgtagctgACTTTGAGTGGGTAGTTGTCAAAAAATATTTCATTCA

Function

NR:

description
heat shock protein HSP 90-alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU796211 False 2202 lncRNA 0.47 5 34171056 34177610
TU796213 True 2122 lncRNA 0.48 6 34171056 34177610

Neighbor

gene id symbol gene type direction distance location
LOC110529846 LOC106571592 coding downstream 13419 34136558 ~ 34157637 (-)
ankef1a LOC106571587 coding downstream 141925 34017010 ~ 34029131 (-)
LOC110529840 LOC106571603 coding downstream 161679 33975488 ~ 34009377 (-)
LOC110529836 LOC106571586 coding downstream 329454 33831672 ~ 33841602 (-)
cdc42bpab LOC106571585 coding downstream 348818 33719374 ~ 33822238 (-)
LOC110529843 LOC105030678 coding upstream 77905 34255515 ~ 34257262 (-)
LOC110529848 LOC106571583 coding upstream 367546 34545156 ~ 34550128 (-)
LOC118965512 NA coding upstream 620235 34797845 ~ 34799304 (-)
LOC110529850 fau coding upstream 1124944 35302554 ~ 35304730 (-)
LOC110529851 prpf39 coding upstream 1129318 35306928 ~ 35321805 (-)
G699592 NA non-coding downstream 53165 34117662 ~ 34117891 (-)
G699582 NA non-coding downstream 60768 34109793 ~ 34110288 (-)
G699537 NA non-coding downstream 137600 34033221 ~ 34033456 (-)
G699531 NA non-coding downstream 152499 34018141 ~ 34018557 (-)
G699515 NA non-coding downstream 154819 34015919 ~ 34016237 (-)
G699755 NA non-coding upstream 6722 34184332 ~ 34184851 (-)
G699757 NA non-coding upstream 11456 34189066 ~ 34189394 (-)
G699803 NA non-coding upstream 96740 34274350 ~ 34274640 (-)
G699866 NA non-coding upstream 199938 34377548 ~ 34377783 (-)
G699868 LOC107678310 non-coding upstream 202297 34379907 ~ 34380295 (-)
G699468 NA other downstream 218700 33943022 ~ 33952356 (-)
G698356 NA other downstream 1180995 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 1671646 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 1953507 32214451 ~ 32217572 (-)
G701454 NA other upstream 1405388 35582998 ~ 35589877 (-)
LOC110529865 LOC106571568 other upstream 1463745 35633473 ~ 35705333 (-)
G701618 LOC106571560 other upstream 1723013 35900623 ~ 35918175 (-)
LOC110529880 LOC106571768 other upstream 3177486 37355096 ~ 37361922 (-)
LOC110530908 otof other upstream 3311617 37474229 ~ 37626960 (-)

Expression


Co-expression Network