Gene
RNA
| Item | Value |
|---|---|
| gene id | G699904 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 34497340 ~ 34517279 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sphingosine-1-phosphate lyase 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU796437 | True | 221 | lncRNA | 0.58 | 2 | 34497340 | 34517279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529843 | LOC105030678 | coding | downstream | 240078 | 34255515 ~ 34257262 (-) |
| LOC110529846 | LOC106571592 | coding | downstream | 339703 | 34136558 ~ 34157637 (-) |
| ankef1a | LOC106571587 | coding | downstream | 468209 | 34017010 ~ 34029131 (-) |
| LOC110529840 | LOC106571603 | coding | downstream | 487963 | 33975488 ~ 34009377 (-) |
| LOC110529836 | LOC106571586 | coding | downstream | 655738 | 33831672 ~ 33841602 (-) |
| LOC110529848 | LOC106571583 | coding | upstream | 27877 | 34545156 ~ 34550128 (-) |
| LOC118965512 | NA | coding | upstream | 280566 | 34797845 ~ 34799304 (-) |
| LOC110529850 | fau | coding | upstream | 785275 | 35302554 ~ 35304730 (-) |
| LOC110529851 | prpf39 | coding | upstream | 789649 | 35306928 ~ 35321805 (-) |
| LOC110529854 | LOC106571577 | coding | upstream | 909037 | 35426316 ~ 35429137 (-) |
| G699877 | NA | non-coding | downstream | 100140 | 34396872 ~ 34397200 (-) |
| G699876 | NA | non-coding | downstream | 101228 | 34395902 ~ 34396112 (-) |
| G699873 | NA | non-coding | downstream | 103454 | 34389663 ~ 34393886 (-) |
| G699872 | NA | non-coding | downstream | 113877 | 34382927 ~ 34383463 (-) |
| G699871 | NA | non-coding | downstream | 114452 | 34382648 ~ 34382888 (-) |
| G699903 | NA | non-coding | upstream | 8334 | 34525613 ~ 34530768 (-) |
| G699979 | NA | non-coding | upstream | 36538 | 34553817 ~ 34556091 (-) |
| G700038 | LOC100136012 | non-coding | upstream | 125499 | 34642778 ~ 34643077 (-) |
| G700064 | NA | non-coding | upstream | 142033 | 34659312 ~ 34659599 (-) |
| G700066 | NA | non-coding | upstream | 142727 | 34660006 ~ 34660550 (-) |
| G699468 | NA | other | downstream | 544984 | 33943022 ~ 33952356 (-) |
| G698356 | NA | other | downstream | 1507279 | 32989245 ~ 32990061 (-) |
| G697774 | LOC106571626 | other | downstream | 1997930 | 32498799 ~ 32499410 (-) |
| LOC110529804 | ypel5 | other | downstream | 2279791 | 32214451 ~ 32217572 (-) |
| G701454 | NA | other | upstream | 1065719 | 35582998 ~ 35589877 (-) |
| LOC110529865 | LOC106571568 | other | upstream | 1124076 | 35633473 ~ 35705333 (-) |
| G701618 | LOC106571560 | other | upstream | 1383344 | 35900623 ~ 35918175 (-) |
| LOC110529880 | LOC106571768 | other | upstream | 2837817 | 37355096 ~ 37361922 (-) |
| LOC110530908 | otof | other | upstream | 2971948 | 37474229 ~ 37626960 (-) |
