G710796



Basic Information


Item Value
gene id G710796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 44071616 ~ 44072056 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU808215
TCATTCTGTAGAGTGTGTCCACTTTTGGTTATCTTACCCTAACGATGTAACTATAAAACGCATATTGGATTATCTCTGTCTGGGTGAAACATTTGAAATTTAACTGCCCTTAAGGTCTGAACATGTTATATTTTTTCTTCCCAGTATAAGAGAAGTTGCGGGATTTATTGAATAAACTGAATAAAGTTAGAGAGAATTAAGAGGGAATCTCGATGTAATTTATAATGTCGTACAAAGCCTAAGGTTTTCCACCAAACTAATTATCATTGCGTGATTAATGTGATGtagtaaagtaattgaaatacattgCATAAGTAAACATAATCTACTTTTATTAAAAGGCGCAATATCTGTTTCCTAGTCATTAACTGTTTTTCTTCTGGGAATTGCAGATAGTGACATGTTTTGATTTTACTTATAAACTGGGTTTATTTGCGGAGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU808215 True 441 lncRNA 0.32 1 44071616 44072056

Neighbor


gene id symbol gene type direction distance location
LOC118965613 NA coding downstream 308298 43759329 ~ 43763318 (-)
mycb myc coding downstream 469311 43599754 ~ 43602305 (-)
puf60a puf60 coding downstream 1545030 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 1651529 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 2342629 41725469 ~ 41728987 (-)
efr3a efr3a coding upstream 112937 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 318822 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 908913 44980969 ~ 44984268 (-)
basp1 NA coding upstream 1050027 45122083 ~ 45173741 (-)
znf622 znf622 coding upstream 1412962 45485018 ~ 45495101 (-)
G710793 NA non-coding downstream 370 44070693 ~ 44071246 (-)
G710795 NA non-coding downstream 2415 44068863 ~ 44069201 (-)
G710800 NA non-coding downstream 3422 44067939 ~ 44068194 (-)
G710785 NA non-coding downstream 15264 44053030 ~ 44056352 (-)
G710781 NA non-coding downstream 27657 44043646 ~ 44043959 (-)
G710809 NA non-coding upstream 2702 44074758 ~ 44075236 (-)
G710817 NA non-coding upstream 14117 44086173 ~ 44086410 (-)
G710819 NA non-coding upstream 15605 44087661 ~ 44087861 (-)
G710820 NA non-coding upstream 16307 44088363 ~ 44088689 (-)
G710822 NA non-coding upstream 21959 44094015 ~ 44095958 (-)
G709454 NA other downstream 900534 43170760 ~ 43171082 (-)
G709272 NA other downstream 1350917 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 4112003 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4845303 39219644 ~ 39226313 (-)
G704874 NA other downstream 5757813 38313489 ~ 38313803 (-)
G711133 NA other upstream 466737 44538793 ~ 44539504 (-)
G712814 NA other upstream 1385721 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 2239074 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 2979411 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3106368 47178424 ~ 47178736 (-)

Expression



Co-expression Network