G718544


Basic Information

Item Value
gene id G718544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 49859964 ~ 49860783 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU816425
gtcgacctctaagcagggtagcctagtcgttagagtgttggactagcagCCGAAaggttgacaaggtacaaatctgtcgttctgcccctgaacaaggcagttaacccagtgttcctaggccgtccttgaaaataagaatttgttcttaactgactttcctagttaaataaaaatataaaggCTCAAGTTTATTTGGGATTGAGGCATAGagcataattttttttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacacatacaacaacacatggagtaaaacaaacatacagtcaataatacagtagaaaaataagtctatatacacaatgtgagcaagtgaggtgagataagggaagtaaaggcaaaaaaaggccatggtggcgaagtaaatacaatatagcaagtaaaacattggaatggttgatttgcagtggaagaatgtgcaaagtagagagaaaTTATGGGGTGCAAAATAATatcgttgtcacgccctgaccttagttatctttgttttctttattattttggttaggtcagggtgtgacgagggtggtatgtgtgttttggtcttgtctagggttttttgtacatctatggggttttggtatgtctaggtatatgtaggtctatggtggcctgaattggttcccaatcagagacagctgtttatcgttgtctctgattggggtttctatttaggttgccattttccattttggttttgtgggttactgtctatgtgtagttgcatgtcagcact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU816425 True 820 lncRNA 0.39 1 49859964 49860783

Neighbor

gene id symbol gene type direction distance location
zgc:110269 LOC106568705 coding downstream 204806 49647933 ~ 49655158 (-)
LOC110530006 LOC106568704 coding downstream 212116 49635475 ~ 49647848 (-)
LOC110530005 NA coding downstream 229195 49629577 ~ 49630769 (-)
LOC110530004 LOC106568703 coding downstream 247735 49601539 ~ 49612229 (-)
LOC118965614 NA coding downstream 281157 49577103 ~ 49578807 (-)
LOC110530011 LOC106568709 coding upstream 5489 49866272 ~ 49937001 (-)
LOC118965522 NA coding upstream 20860 49881643 ~ 49886226 (-)
LOC110530012 LOC106568711 coding upstream 104131 49964914 ~ 49970082 (-)
LOC118965625 NA coding upstream 122606 49983389 ~ 49986205 (-)
LOC110530015 LOC106568800 coding upstream 232714 50093497 ~ 50095929 (-)
G718541 NA non-coding downstream 4565 49855104 ~ 49855399 (-)
G718537 NA non-coding downstream 9436 49850241 ~ 49850528 (-)
G718461 LOC106568706 non-coding downstream 117147 49741785 ~ 49742817 (-)
G717596 NA non-coding downstream 176289 49650591 ~ 49683675 (-)
G718546 NA non-coding upstream 3722 49864505 ~ 49864733 (-)
G718580 NA non-coding upstream 63278 49924061 ~ 49924328 (-)
G718581 NA non-coding upstream 63859 49924642 ~ 49924880 (-)
G718590 NA non-coding upstream 74050 49934833 ~ 49935036 (-)
G718489 NA other downstream 22268 49785674 ~ 49837696 (-)
G716488 NA other downstream 1071002 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 1077449 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 1098801 48759912 ~ 48761163 (-)
dlg1l LOC106568684 other downstream 1243441 48356004 ~ 48616588 (-)
G719151 NA other upstream 1076145 50936928 ~ 50939471 (-)
LOC110530043 LOC106568739 other upstream 1391572 51252355 ~ 51259061 (-)
G721275 NA other upstream 2900256 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 3602399 53462034 ~ 53478913 (-)

Expression


Co-expression Network