G719761


Basic Information

Item Value
gene id G719761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 51311889 ~ 51312674 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU817748
CGGAAGATTGCATTTATTTAAATAGATACAAATTTGCAATGTAACAAAACTATTGGCATATGAAATTCAAACACCATTTAAATGAAAACATGGCTCACTTCATTTCTTTGCAGCTAGTGTCTAACACTAGTTTGTGTTGCTCAACCAAAACCCTAGctctgtctccatgtcttttTCCCCTCCATTTACATTGTTCACAGATCTTACAATAAGAGTGCTGAATAAAAATGAGGTAAGAAAGTGGTTTGAAGATTACAGATCATGCAGAACATGCTAAACAGCAACAAAAATATTTTGTTGTGAAGGAGTAAAAAGTAACAAAATACATAGAAGTGTGCAAAAATAATAGAATTACACAGCTTTGCATCTTTGGTTACAAAGTAAGTTTTGAACGATTTCACAGCATTTTTTTGCCCCCATCCCGGAATCAAATGCACAAGACGATATTAGGGTAGGGGCGGGGAAGTATGGCAATAAACTGTCAATTTGAGACAAAGAAACTAGCAATTGGATTGGAAGTTGTCGTCAAAATAGCCTACCGCAGATTCATGTTCAGATTTCCTGTCACACGAGTTGGTGTTCACCTGTACAAACTTTGCTATGCACATAATACTTTACACTCTATACAAAATGTACATTCAAACTAGATCTTGACTGATGCGGATAAACAATTTCATCGTAAAACAGCCCATTTAGTGTTAGACGTGTCAGAGTTGCTTTATTATTGCCTACATATTCGACTGATTAATGCAATAAACTGCCCATTGGATGTAGGGCCAGTTATTT
>TU817752
ACCATTTAAATGAAAACATGGCTCACTTCATTTCTTTGCAGCTAGTGTCTAACACTAGTTTGTGTTGCTCAACCAAAACCCTAGctctgtctccatgtcttttTCCCCTCCATTTACATTGTTCACAGATCTTACAATAAGAGTGCTGAATAAAAATGAGGTAAGAAAGTGGTTTGAAGATTACAGATCATGCAGAACATGCTAAACAGCAACAAAAATATTTTGTTGTGAAGGAGTAAAAAGTAACAAAATACATAGAAGTGTGCAAAAATAATAGAATTACACAGCTTTGCATCTTTGGTTACAAAGTAAGTTTTGAACGATTTCACAGCATTTTTTTGCCCCCATCCCGGAATCAAATGCACAAGACGATATTAGGGTAGGGGCGGGGAAGTATGGCAATAAACTGTCAATTTGAGACAAAGAAACTAGCAATTGGATTGGAAGTTGTCGTCAAAATAGCCTACCGCAGATTCATGTTCAGATTTCCTGTCACACGAGTTGGTGTTCACCTGTACAAACTTTGCTATGCACATAATACTTTACACTCTATACAAAATGTACATTCAAACTAGATCTTGACTGATGCGGATAAACAATTTCATCGTAAAACAGCCCATTTAGTGTTAGACGTGTCAGAGTTGCTTTATTATTGCCTACATATTCGACTGATTAATGCAATAAACTGCCCATTGGATGTAGGGCCAGTTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU817748 False 786 lncRNA 0.36 1 51311889 51312674
TU817752 True 714 lncRNA 0.37 1 51311889 51312602

Neighbor

gene id symbol gene type direction distance location
LOC110530043 LOC106568739 coding downstream 52828 51252355 ~ 51259061 (-)
LOC110530042 kcnt2 coding downstream 122277 51127614 ~ 51189612 (-)
LOC110530040 LOC106568735 coding downstream 244088 51032565 ~ 51067801 (-)
LOC110530036 LOC106568732 coding downstream 463084 50834540 ~ 50848805 (-)
LOC110530035 LOC106568731 coding downstream 518295 50791220 ~ 50793594 (-)
LOC110530045 LOC106568741 coding upstream 3620 51316294 ~ 51323600 (-)
LOC110530046 LOC106568804 coding upstream 65230 51377904 ~ 51380863 (-)
mfsd8l2 LOC106568744 coding upstream 183406 51496080 ~ 51516909 (-)
LOC110530051 LOC106568746 coding upstream 212593 51525267 ~ 51546934 (-)
LOC110530052 LOC106568747 coding upstream 248126 51560800 ~ 51582355 (-)
G719702 NA non-coding downstream 83218 51228401 ~ 51228671 (-)
G719701 NA non-coding downstream 83587 51228088 ~ 51228302 (-)
G719697 NA non-coding downstream 87124 51224529 ~ 51224765 (-)
G719696 LOC106613263 non-coding downstream 87483 51223886 ~ 51224406 (-)
G719762 NA non-coding upstream 634 51313308 ~ 51313537 (-)
G719767 NA non-coding upstream 15532 51328206 ~ 51328432 (-)
G719835 LOC106568743 non-coding upstream 126280 51438954 ~ 51439395 (-)
G719841 LOC106568743 non-coding upstream 132546 51445220 ~ 51445520 (-)
G719151 NA other downstream 372418 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 1422637 49866272 ~ 49937001 (-)
G718489 NA other downstream 1474193 49785674 ~ 49837696 (-)
G716488 NA other downstream 2522927 48788521 ~ 48788962 (-)
G721275 NA other upstream 1448365 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 2150508 53462034 ~ 53478913 (-)
G722459 NA other upstream 2185474 53495804 ~ 53499730 (-)
G722602 NA other upstream 2490769 53803443 ~ 53856065 (-)
G722670 NA other upstream 2613554 53926228 ~ 53927959 (-)

Expression


Co-expression Network