G722523


Basic Information

Item Value
gene id G722523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 53677925 ~ 53679995 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU820840
ACCTAGGTAACTTTATTGAGAACATCTTTTCAGAGGGTCATTTCCATATGAATTCAGTCTAGCTGACGATCAGCCTCAAGATCACCTCAAACAAGATGAGCCGACGCCACCTAAAACATATGGCCTGCAGAGTTTATACTGTACATGCTTTCAAACAAGAATTAAGTGTGACTGTTTCAGGTAAGATATGATTATCTAATGATCGAAAGGTTCTGGACACTGCGAGTCCTTAAACTATTACCTGATAATGGTCTAAGGAAACAAACCATGTATACACAGCCCATAGTTTGACAGGATTCACAACTACACTACCAGATCATTGTAAATAGCaacagagggatatagagagcaTATCAGGAACAATACGCCCCATTTTAGTATTTACATTTGTCAAACTATGCCCCACATTAACAGTTTAACATCAGCTGGTTACTTTTGAGACAAGATTCTATACACCTGAATGGCACATTTACCCCACATATTGACTTACCGGTAAGTCCTTTTAGCAAGGCGTATCCTATAGGTTCACACAGATCGATTGAGCTAAGTTGCAACTCAGCAGCTATGCTTTTACTTGTGGAGCCATGCCATGTTAACAGTCAGGTAAGTCCACTTCCCTATACTATCCAGACACTTATCTTCATCAAGATAACTTTTCTAGATGTGACGACAATCTAGCTGCTAGTGGTAGATTGTAGCACGTCTACGGGGAAACAACGGTTATGCACATTGACAAACATCGAGCATTGTGTGTTGCTGCAAAATTGGTCTGTTTTTATACTGTAAAATGGTTTGCCCCAATATGAACCTGTGGGAGCATCCTCCATATTCACACCATTAATCCCCTCGTTAACTCAACAGTGTGTGTGCTTTCCTCCACTGTTGTCACAATGTAAACTGAGGGAGGGTCCTTAATTGATCAAGAAACGTTTCCATTAAGGCAATTCAATCACTCAAACTAGGAGACGTCAAAACTTTCAGGAATGCAGCCTTCTGAGGCAGCATTCCCCATAACAACCTGAGACAAATTCAATCTTAAGTCTATACACAGTCTTTCCTTTTCAGTAACTGTAATAATTGTTGGGGATCTCACAAGCATCCTTCAGTGTTATGGTATACCGCCGTCATCGTATTTATCTCAAACTAAAATAAGAGGCTGTGGAGACAATATTCTATTTACTGTGGAGACAATATTCTATTTACTCCAAGCCCAGAAGGATGTACATAAAATGGCATAGAACCTAATTGATTAAATGGACATGACTGTAAATCATGCAGGTCAAAATACACATCTAGTACAAGTAAACTAATGAAAGCAAACAAGGGCACTGAAAATGCTCCTCACGTAAAAACATGGTCAAGCAACAATTAAATATGAGTCCTAGGGTGGAGGAGGTAATGTTATTGTTATGAAGACAGAGCTTTTCAGCTATGTGCCAATCGAAGACTTAAAAAAGGACAGTTAAGGgaagaaaaaataaaaatgcaaaaGTAAATAAAAGACAAAACTCTCAACATCCCAAGATCATGTTGTACGATGTAGGAAGTGGTATGTCCTGTCTGTCAAATGCAACTTTGCCTGTGTGCTTCTTTATCTGTAGTTCTGTGTGTGTACAGCACTCTATGAGTCCTCATTTAATTCCCGACTGTCGGTTCTGGCAATTTTCCGCGGGGGTGCAgtgttctctccctctgcttgttcCTGCTCCCGCTTTTTGGC

Function

NR:

description
PREDICTED: DET1- and DDB1-associated protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU820840 True 1720 lncRNA 0.40 2 53677925 53679995

Neighbor

gene id symbol gene type direction distance location
LOC110530114 LOC106568966 coding downstream 17919 53635788 ~ 53709367 (-)
LOC110530113 LOC106598949 coding downstream 42333 53599635 ~ 53635592 (-)
LOC110530111 LOC106598945 coding downstream 92304 53500456 ~ 53585621 (-)
LOC118965526 NA coding downstream 146991 53527596 ~ 53533919 (-)
LOC110529122 LOC106568971 coding downstream 199012 53462034 ~ 53478913 (-)
LOC110530116 tm16h coding upstream 1613 53681608 ~ 53712234 (-)
trnak-cuu-2 NA coding upstream 16633 53696628 ~ 53696700 (-)
plvapa LOC106568963 coding upstream 42177 53722172 ~ 53728671 (-)
ocel1 LOC106568960 coding upstream 126668 53806663 ~ 53812192 (-)
LOC110530934 LOC106568959 coding upstream 138711 53818706 ~ 53880785 (-)
G722488 NA non-coding downstream 82152 53595556 ~ 53595773 (-)
G722459 NA non-coding downstream 180498 53495804 ~ 53499730 (-)
G721825 NA non-coding downstream 196800 53480893 ~ 53481125 (-)
G722612 NA non-coding upstream 148684 53828679 ~ 53829059 (-)
G722659 NA non-coding upstream 225153 53905148 ~ 53905462 (-)
G722686 NA non-coding upstream 264599 53944594 ~ 53944946 (-)
G722694 NA non-coding upstream 272200 53952195 ~ 53952400 (-)
G721275 NA other downstream 916474 52761039 ~ 52761451 (-)
LOC110530043 LOC106568739 other downstream 2418906 51252355 ~ 51259061 (-)
G719151 NA other downstream 2738454 50936928 ~ 50939471 (-)
G722602 NA other upstream 123448 53803443 ~ 53856065 (-)
G722670 NA other upstream 246233 53926228 ~ 53927959 (-)
G722761 NA other upstream 444384 54124379 ~ 54139341 (-)
G722854 NA other upstream 571119 54251114 ~ 54251546 (-)
G722864 LOC106581475 other upstream 601690 54281685 ~ 54281978 (-)

Expression


Co-expression Network