G722728


Basic Information

Item Value
gene id G722728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 54033291 ~ 54034722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU821086
gaaaagtatattatacagtgtgcaaatgtagtaatattggggaggtaaggcaataaataggccatagtggcgaaataattacaatttagcattaacctttctgatctccccatcccggatccgggatcgtgaatacagactcaagctcattaccataacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattttcaaaatatgcttctcaaccattgcaaaacaagcatttgtgtaacagtattgatggctaacgtagcatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaaaccctgtatccaggattgtttAAATcttatcagcaagctcattagcataacacaacgttaactatttatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaatcatttgtgtaaaagtagctagctagcgttagcatttcgcgttagcatttagcgttagcattagcgttagcatccagcacgcaacattaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttctgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattccttgtgtattagaaatagctctgttttatacatcacatttggctaccaaaaaaaatccgaaaattcagtcctcaaaacgcgaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatgctttctcccctgaatcaaatggtaaagtagaagcagctggcaattgcgcaccgaattcgacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattcgttgcgcaatcacagccatataaggagagaatggaaaacagagcttcagaaattctgctaattcctgggtgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattcttaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU821086 True 1432 lncRNA 0.37 1 54033291 54034722

Neighbor

gene id symbol gene type direction distance location
cnn2 cnn2 coding downstream 18857 54008434 ~ 54014434 (-)
LOC110530123 rps15 coding downstream 30103 54001129 ~ 54003188 (-)
LOC118965682 NA coding downstream 30724 54002434 ~ 54002567 (-)
LOC110530121 LOC106568956 coding downstream 37987 53965997 ~ 53995304 (-)
insl3 NA coding downstream 115674 53914820 ~ 53917617 (-)
LOC110530125 LOC106568953 coding upstream 23400 54058122 ~ 54105410 (-)
LOC110530126 LOC106569003 coding upstream 92346 54127068 ~ 54131739 (-)
LOC110530134 LOC106568945 coding upstream 339511 54374233 ~ 54377574 (-)
LOC110530139 LOC100194659 coding upstream 408408 54443130 ~ 54445222 (-)
LOC110530140 LOC106568942 coding upstream 411497 54446219 ~ 54465716 (-)
G722699 NA non-coding downstream 67884 53965176 ~ 53965407 (-)
G722696 NA non-coding downstream 78862 53954197 ~ 53954429 (-)
G722694 NA non-coding downstream 80891 53952195 ~ 53952400 (-)
G722686 NA non-coding downstream 88345 53944594 ~ 53944946 (-)
G722659 NA non-coding downstream 127829 53905148 ~ 53905462 (-)
G722805 LOC106568951 non-coding upstream 145720 54180442 ~ 54185532 (-)
G722812 NA non-coding upstream 153347 54188069 ~ 54189214 (-)
G722814 NA non-coding upstream 154670 54189392 ~ 54243058 (-)
G722773 LOC106568951 non-coding upstream 169966 54204688 ~ 54207815 (-)
G722849 NA non-coding upstream 212350 54247072 ~ 54247859 (-)
G722670 NA other downstream 105332 53926228 ~ 53927959 (-)
G722602 NA other downstream 177226 53803443 ~ 53856065 (-)
G722459 NA other downstream 533561 53495804 ~ 53499730 (-)
LOC110529122 LOC106568971 other downstream 569527 53462034 ~ 53478913 (-)
G721275 NA other downstream 1271840 52761039 ~ 52761451 (-)
G722761 NA other upstream 89657 54124379 ~ 54139341 (-)
G722854 NA other upstream 216392 54251114 ~ 54251546 (-)
G722864 LOC106581475 other upstream 246963 54281685 ~ 54281978 (-)
G723955 NA other upstream 1342559 55377281 ~ 55377776 (-)
G723966 NA other upstream 1361902 55396624 ~ 55396885 (-)

Expression


Co-expression Network