G724272


Basic Information

Item Value
gene id G724272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55588488 ~ 55589616 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822762
tagcgggatcattttcatcaacacccgctgaattgtagcgcgccaaattcaaattaaattactaaaaatatttaattttcatgaaatgaaagtgcaatatagcaaaacacagcttagcttgttgttaatccacctggcgtgtcagatttcaatacagcttttcggcgaaagcataacaagcgtttatgtaagaacatctctctcagtagacaaatattacaaacactagcagccaagtagattggtcacgaaagtcagaaaagcaatagattaaatcgcttacctttgatgatcttcggatgtttgcactcacgagactcccagttacacactaaatgttccttttgttccataaagattatttttatatccaaaatacctccatttgtttggcgcgttatgttcagaaatccacagtctcgagcggtcacgacatcgcagacgaaaattccaaatagtatccgtaatgtccacagaaacatgtcaaaccttttttataatcaaccctcgggttgtttttaaaatatataatcgataatatatcaaccgggactgtcgctttttcaataggagagggagagacaatggctgccccactctgttgcgcaagcaaaactctgcgaacacccagctatccactgacacgatgttatctttctctctcatttttctaaataaaagcctgaaacgatgtctaaagactgttgacacctggGGGAAGCCATAGGacaaggaatctggttgatatcccagagctttcaggaaaaacatcacttcctggtttgattttcctcaggttttcgcctgcaatatcagttctgttatactcacagacaatattttgaccgttttggaaactttagagtgttttctatcctaatctgacgaTTTcttgcatattctagtttctgggcctgagaaataggcagtttcaaatgggtatgtttttttttacccaaaaacgaaaatcctgccccctacactcaagaagttaacggtcaattaccatgagaccggcagttatttgcttgacaatcaccggctgacaaagtttcatgaccgccacagccctaactTCCCTCTAGGGTCCCTGTAACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822762 True 1099 lncRNA 0.40 2 55588488 55589616

Neighbor

gene id symbol gene type direction distance location
LOC118965626 NA coding downstream 24389 55555878 ~ 55564099 (-)
odr4 odr4 coding downstream 44354 55533616 ~ 55544134 (-)
LOC110530166 arpc5 coding downstream 120418 55461196 ~ 55468070 (-)
si:ch211-106h4.4 LOC106568915 coding downstream 132436 55423666 ~ 55456052 (-)
LOC110530163 LOC106568918 coding downstream 250890 55335612 ~ 55337598 (-)
LOC110530171 LOC106568907 coding upstream 94009 55683625 ~ 55688984 (-)
LOC110530174 LOC106568905 coding upstream 140818 55730434 ~ 55764053 (-)
LOC110530175 LOC106569017 coding upstream 179810 55769426 ~ 55774173 (-)
LOC110530176 LOC106568901 coding upstream 210292 55799908 ~ 55814928 (-)
LOC110530178 LOC106568902 coding upstream 225768 55815384 ~ 55839341 (-)
G724264 NA non-coding downstream 12801 55575059 ~ 55575687 (-)
G724246 NA non-coding downstream 41371 55546847 ~ 55547117 (-)
G724245 NA non-coding downstream 42493 55545734 ~ 55545995 (-)
G724042 NA non-coding downstream 77924 55510338 ~ 55510564 (-)
G724020 NA non-coding downstream 88628 55499466 ~ 55499860 (-)
G724366 LOC106568906 non-coding upstream 128248 55717864 ~ 55718713 (-)
G724370 NA non-coding upstream 131468 55721084 ~ 55721324 (-)
G724371 NA non-coding upstream 132487 55722103 ~ 55722418 (-)
G724372 NA non-coding upstream 133361 55722977 ~ 55723486 (-)
G724373 NA non-coding upstream 134401 55724017 ~ 55724208 (-)
G723966 NA other downstream 191603 55396624 ~ 55396885 (-)
G723955 NA other downstream 210712 55377281 ~ 55377776 (-)
G722864 LOC106581475 other downstream 1306510 54281685 ~ 54281978 (-)
G722854 NA other downstream 1336942 54251114 ~ 54251546 (-)
G722761 NA other downstream 1449147 54124379 ~ 54139341 (-)
G724287 LOC106568908 other upstream 45922 55635538 ~ 55646014 (-)
G724400 NA other upstream 195901 55785517 ~ 55791485 (-)
G724943 LOC106604981 other upstream 530587 56120203 ~ 56128288 (-)
G725007 LOC106568897 other upstream 629900 56219516 ~ 56232939 (-)
LOC110530186 tm56b other upstream 785037 56374588 ~ 56386555 (-)

Expression


Co-expression Network