G724366 (LOC106568906)


Basic Information

Item Value
gene id G724366
gene name LOC106568906
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55717864 ~ 55718713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822856
ATGTACATTTGGAAGTCAAAACTCTCTGTAAAATAGTCAAGTGGATACACAGCCCAGATATCAACTTCATACTCAACACTCACTGTAGTTAGCAGGTGCAGGATGTCCCTGGTCTCCTAGCTTATTCTCCAGGTTGTTGTGGTGGATCTCACTGGCCGGTCTGAACACCAGCATGGCTGGTGGTTGACTGAGGTTGAGAGGAGCCTGTAGTTCCCACACAAGACCTTCATGGTCATGATCCAGGTCATGGTCGACCTCCGGGGGGTTGTCCGGGACCCGAACACCACTGTGGTTTCCCAGCTTCCCATAGTCCTCGCTGGCCTCAATCTCATTGTCATTCAAGGAGAGTTCAGTGGCAGTGGCGTTGGCCATTGTTTCTTGGGCCACCGGGGGCCATGATTCTGGGGCCGCAGGTTCGACAACGGACAGTGCTCGTATCTGGACCTCCTCTGGAGGCGAGGCTACTGGGGTTGTTGCGCGGGCTTCTGGGGTGCGAGGTACGGTGTACTCGTATGTGATGTGGGGCATCTTTCCGTTCAGGTTGTAGTACTTGTCATGACGTTTAGCCCCTGGTCAGTGGGTCCTTGGGCGATGATGTACTCAAATCCATCTGATAAGAGGTTAGCGGGTCTCCTGTACTTGAAGACTGTGCCAGCAACACGGAAGTTACGGGGATTGTCGATAATTGTGTTCCCATTGAAAAAGAAGTGTCCTGCTTCATCGGATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822856 True 727 lncRNA 0.52 2 55717864 55718713

Neighbor

gene id symbol gene type direction distance location
LOC110530171 LOC106568907 coding downstream 28880 55683625 ~ 55688984 (-)
LOC110530170 LOC106568909 coding downstream 102930 55567843 ~ 55614934 (-)
LOC118965626 NA coding downstream 153765 55555878 ~ 55564099 (-)
odr4 odr4 coding downstream 173730 55533616 ~ 55544134 (-)
LOC110530166 arpc5 coding downstream 249794 55461196 ~ 55468070 (-)
LOC110530174 LOC106568905 coding upstream 11721 55730434 ~ 55764053 (-)
LOC110530175 LOC106569017 coding upstream 50713 55769426 ~ 55774173 (-)
LOC110530176 LOC106568901 coding upstream 81195 55799908 ~ 55814928 (-)
LOC110530178 LOC106568902 coding upstream 96671 55815384 ~ 55839341 (-)
LOC110530179 LOC106568900 coding upstream 154240 55872953 ~ 55896342 (-)
G724272 NA non-coding downstream 128248 55588488 ~ 55589616 (-)
G724264 NA non-coding downstream 142177 55575059 ~ 55575687 (-)
G724246 NA non-coding downstream 170747 55546847 ~ 55547117 (-)
G724245 NA non-coding downstream 171869 55545734 ~ 55545995 (-)
G724042 NA non-coding downstream 207300 55510338 ~ 55510564 (-)
G724370 NA non-coding upstream 2371 55721084 ~ 55721324 (-)
G724371 NA non-coding upstream 3390 55722103 ~ 55722418 (-)
G724372 NA non-coding upstream 4264 55722977 ~ 55723486 (-)
G724373 NA non-coding upstream 5304 55724017 ~ 55724208 (-)
G724398 NA non-coding upstream 45610 55764323 ~ 55764554 (-)
G724287 LOC106568908 other downstream 71850 55635538 ~ 55646014 (-)
G723966 NA other downstream 320979 55396624 ~ 55396885 (-)
G723955 NA other downstream 340088 55377281 ~ 55377776 (-)
G722864 LOC106581475 other downstream 1435886 54281685 ~ 54281978 (-)
G722854 NA other downstream 1466318 54251114 ~ 54251546 (-)
G724400 NA other upstream 66804 55785517 ~ 55791485 (-)
G724943 LOC106604981 other upstream 401490 56120203 ~ 56128288 (-)
G725007 LOC106568897 other upstream 500803 56219516 ~ 56232939 (-)
LOC110530186 tm56b other upstream 655940 56374588 ~ 56386555 (-)
G725280 LOC106568997 other upstream 869630 56588343 ~ 56589271 (-)

Expression


Co-expression Network