G724406 (LOC106568904)


Basic Information

Item Value
gene id G724406
gene name LOC106568904
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55793038 ~ 55793818 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822916
CCTCTGCTGGCTAAACAAGGTTAAGGCAGTGTATAATGTCGCAGGTATGAGGCAGAATAAGAGGGATTTTGTGTGCTAATGCTTACTAGCTTACCTTACTCCAACCACCTCTGTAGATGAAGGGAAGAGTGAAGGCCACACAGGTAAGCAGCACTGTTAATATCATCAACCCTCGATGCACCTGGAACCAAATTCTCTGACCAAACAGTGTTCTCTCTGGCCAATCAGGCTTGAAGTAGCTGGCTAGGAAAGTACCCGTGCTTCCAGCCAACATCCAGGCAATTAACATCAGAACGCTGTGAAATTTCATGAGAAGTGGTGATCGAGAGCCATTGAGAATCTCTGCTGGGCCGTTGATGACCGACTGCTGTGAGGATATGAGGGGTTGGCGGCCATGCCTGTGCACCTCGCCTCAAAACCATGGTTTGAGAGAGAGACGAGTTAGCAGCAAGTAATTTACAGTAGCTAC

Function

NR:

description
putative ferric-chelate reductase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822916 True 469 lncRNA 0.48 3 55793038 55793818

Neighbor

gene id symbol gene type direction distance location
LOC110530175 LOC106569017 coding downstream 18865 55769426 ~ 55774173 (-)
LOC110530174 LOC106568905 coding downstream 28985 55730434 ~ 55764053 (-)
LOC110530171 LOC106568907 coding downstream 104054 55683625 ~ 55688984 (-)
LOC110530170 LOC106568909 coding downstream 178104 55567843 ~ 55614934 (-)
LOC118965626 NA coding downstream 228939 55555878 ~ 55564099 (-)
LOC110530176 LOC106568901 coding upstream 6090 55799908 ~ 55814928 (-)
LOC110530178 LOC106568902 coding upstream 21566 55815384 ~ 55839341 (-)
LOC110530179 LOC106568900 coding upstream 79135 55872953 ~ 55896342 (-)
LOC110530183 LOC106568896 coding upstream 481273 56275091 ~ 56294377 (-)
LOC110530186 tm56b coding upstream 580770 56374588 ~ 56386555 (-)
G724398 NA non-coding downstream 28484 55764323 ~ 55764554 (-)
G724373 NA non-coding downstream 68830 55724017 ~ 55724208 (-)
G724372 NA non-coding downstream 69552 55722977 ~ 55723486 (-)
G724371 NA non-coding downstream 70620 55722103 ~ 55722418 (-)
G724370 NA non-coding downstream 71714 55721084 ~ 55721324 (-)
G724416 NA non-coding upstream 32217 55826035 ~ 55826459 (-)
G724584 NA non-coding upstream 61661 55855479 ~ 55857407 (-)
G724594 NA non-coding upstream 74381 55868199 ~ 55868491 (-)
G724595 NA non-coding upstream 74735 55868553 ~ 55868787 (-)
G724400 NA other downstream 1553 55785517 ~ 55791485 (-)
G724287 LOC106568908 other downstream 147024 55635538 ~ 55646014 (-)
G723966 NA other downstream 396153 55396624 ~ 55396885 (-)
G723955 NA other downstream 415262 55377281 ~ 55377776 (-)
G722864 LOC106581475 other downstream 1511060 54281685 ~ 54281978 (-)
G724943 LOC106604981 other upstream 326385 56120203 ~ 56128288 (-)
G725007 LOC106568897 other upstream 425698 56219516 ~ 56232939 (-)
G725280 LOC106568997 other upstream 794525 56588343 ~ 56589271 (-)
penka LOC106569009 other upstream 1035823 56828799 ~ 56840147 (-)

Expression


Co-expression Network