G724943 (LOC106604981)


Basic Information

Item Value
gene id G724943
gene name LOC106604981
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56120203 ~ 56128288 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU823540
agcttttcatttaaaaaaaaaaaaacattgccaaTGCCAATTTAACATGTTGAGAGTGAAGTGCGGTGGACAGCTGAAAAGGCTGTAATGTTTATGATTTAGGGCTTGATTCTGTAAAGTCTAACATGTTAGCCGAGCTCATTTGtgctatacaatacaatatactgtaATTACATTTCCAATTACAACCGCCAGCACAGGTCGCCACTGGGATAACCAATGACATTTTCACTGAAATTACCAGTGTTGCATTTATAGTCTGCAAAGGATTTGTCTAATCCAACATCTAGAGACCCTATTATTAATAATTAGACAAAATGCTTAGTGTTGGGAATTGCCGACATAATATAAGCATCTTATTAATATGGGTTTCTATGGAAACGAGATTGTTCTATTTATTAGAACAATCGCCATACGGCAGAGGGGAAAAGCATAAAAAATGTGAATTTGAAAATGGTTTTGAGCCTTGACTGAGGCTGGAGCTATGAGACGATAAGCAGAGGAAATGTGCAATATTTAACCGATTTAGGGCAGCAGCTGCTGGGTATGGTCTTTCTGATTCATGTCCCATTAAAGCTGATACTTCAGGCTGTTGATAGGCACTCCAAAATATTTCAATGAGGACTGAAGAGGGAAGCGTGACATTAAGAATGATTGGGATATGAATGTAACTACATCATCGGATCAGGGCTTTTTTTTCTCACTAAGTGACCTCTCCAGAAAAAACTTTGGGCCCTAGTTATTTTTCCTGGGCCTACAGTTCTTTCTGGGGTGGGTCACAGGGTCAGGAAAAATGTCTGGCCCTAGAGATGAACATGGAGCATAATGAAAAACAGTTTGTATAGAGGAAGGAAAGATGTCAGACTTACATCACAGCTCTTCTCTGGGTTTCTCTTCCAGTGTTTCCTTTCTGTCTTCTTGGCGCCCGTTGAGTGGATGGCAGCGTGGGTCTGCACCCTCGGGTTCAGAGACAGGATACTCTGTGGCACATTGAGCATGGCTCATTAACACAGGGCGGCTTATTGACCCAACACACTATTGTGAAATAGACAATTCGTGTCTGATTCACAATAAGCTGTGAGAGTGGGTTGCAACACCACAAAGGTCTCAGTCTTGAGTGGGTTTGAGAGTAGTACATGTGAGGAAATGCAGGTTATATTGGAAGAAACAGAGACGTAAAAAGGAGAGAGCATTGAGGCACATAGGAATTGTTTTAGGCCGAATCGTTAATGGTAAGAaggattttttgtgtgtgttttagtatAGCATATGTTTACCTTTAGGCTACATGTTTATATGGAGAGAAAATGTCAATTTCTAcactaaaaaaaaaatcataaagtaaatcattttaaaatgtagcctgtgacactttgcttcttgaaggtccaatatcttgaaaacttgactgctgacatgcaaaatattatgggactgtatcaacagtggactaatacaAAAATGCTCAAAGACAGTTCTTTAATCGATTTTCCCTTTAACACTGATTGTGCTAAAACACCATCGGATTGTAATATCAACCTGTATTAATTACACAACACATTCATCTAATCCATAATTCCCAAGCAGGCAAATGCACCGTGAAACAAGACCCACATTGAGGCTGAGTACTAGATTCTCATCCTGTGAGGTATCGTTCTCTGACACCCATTGCCCATTGATTCACGGTTGCCAGTCAAATGATCATGGTATGAGCAAGTCTTTCAAGATGGACACAAATGTAGAGCAGGGTCCTCTGTTCAGATGGCAAACACAATTAACAGCCAAGCtaactgagggagaggagggaagtggGGGGCATAAACAGAAAAGGAAACAGCTATCACTGGCACACTAATACTCATTTCATGCTCTTTGTAGGGTGAAGGGGAACCATGTCTGCATTAGTTTCAGTACACACGACTAGCACAATCAGATAAAGGGAAGAACAGAAAGGCCAAGCGCAAATTGAAATGAGCCACTTTTGGTCCTGGTGCTGAACTGAGACTTGAAGGCAGTTTGTGAGGCGGGTGCCAGCCGGATAATACCATTAAAGCTTGAAACACAAAGCAAGCAGATCCAAGATGTCATTCAACAGAGACCCGCATACCAATGAACTCGGATGAAAGCCCTACAGCTCTTAGTACGTTTATAAGTAGAGTGTAAATTGTGGTACGCTGTTATCAAATGTTTCAGAAATAACTTTTTTGTCTTGTCAATGTCTGAATGTTTTTCAGGTCatgacacacacaacaacaatgaAACGGGGCTGCTATCTGCAAGTTATTTTCTTTCTTAGGTTTCAGTGGGGGAATGAACAGGTCAGCCAAACCTGAAGCAACAAGTTGCACTTCAGTGAGAAACTGAAGTGAATCTATTATTAAAGCCACTATCAATGTATGTCAGGGACGTATAGAGAGTACACGCTGTATTCTGCCTATGGCACAGTGCCTGTTGTGTGGAAACAGTTGCATTATCTTGAGATGCGGGGCATTTGTTGTATTCTTTATCAGACTTTGCCTATGATTCAAGTTTCATTCATTTCTATAGTTAGGCTACACCctaaaaacaccagaaaatgaaCCAAGCACAGTTATGAAAATAGCTTTCATTAATATTATATGATATTGATAACAGCCCTCTATTTTATTAAAGAGTAAGAATACATTATCAAACAAATAATTTGGGGAAGTGTCTTGCTATGCCTTTAGGGTAGAGAAAACCATTCCCGCAGGAGGAATCCAGATACAATTTTAAACACAATTATATTCTCCTTTCCTCGCAGTCCCATGAGGAGCAGTGGAGGCTGACTTTATCAGTCTCCACTGATCACACCCGGCACCCACATCACTAATTCCACAGAGTCAGTAAAATCACAATCACACACTGCAGAAATTAGGAAGCGATGTCAGCCGTTTAGCAGTGGTATTTAAACTCTGGACTGCTGATGCTAATGTTTCGGCCATTGAGCGGCTTGAAGCCACCaatcggccatattggcactccatagtaggagcagtcctccataggaatgaatggaattctacagtatttcaaataaatgcttcaaggACAAAATCATaagtatttaagtatttttttgttattgtagtgggaacagtaacattaacattatctcagaatgccatttcgcaTCGATTGTATAATAATGCTAAAATATATGTATCTGGAActtgtctttcagcatcagtagaacacgcctgactctcctccaccagtcaaacccaagaagaatggtctaatgcctcccatcaaaaagagagctggcccatgcaagcaaaggcagcagcgcagtcatcaacGACAgtacatgcaccatttcttcaccaactaCGAAATTGGGGAAATACGTGTGCACCTGAATTGCGAGTGCACCTGAATTGCGATaactgcagtggccaaaacaataacaagtttgtgctctggtattgtgCCTGGCGGACAATGCACAAGCTCCACCGCAgtctggaccttcacttcctgatcacaggccacaccaagtttGCCCCCGACTGGTGCTTCGGCCTCATCAAGCAGCGCTTCAGAAAGAACAGAGTGAACActgtctgagattgctggtgttgtgaaggacagcactgtgacaggggtcaacatcccacagctggttggactggaggatggtacggtgctggtggaaagctacGGCTGGCAACAACACTCCGTACTTCAGGCCgctgccacagatcaagcagtaccagcacttcagctttgtaGCCTGGTGTTGTCGCCAAGGAGATTTCGGACTgtcgggaccaggtttcagctgctgcgcaacgctgacatccttcctcccatagatgacatccttcctcccatagtCTCCCATAGACCTGTACAAGCACGACCTGaactggacacagctagacaaacttatatttttgagaagatcagggagttttgcaactaagtcaagggcaggacagaaacaggctccccgaatatagattcccttgttcatTCGTGGTTCGGacggaccagtcatcagcactatctgcagtgcctctattcaaatgactctctcctaacacgTAAGTTGTTGCTACACTTTTTTTTgttatcctgctgctcagccactttacccctgatttTATGCATATACAGTAACTACATCGTCCATCACTGATAtcgttattgatattgttcttgtacatactgtatagttGATTTTGACGTGATCTATTTCTGATATTGCGattatgcaagtaaccatttggctgtacCGTTTAAACattctgtagagacccatccacttagcaagaCTTCTAAATATAAAATGAATATTGATATGTGTGGACGTAACATGATTTTGTGACATACCACAACAATATCAAGTGTCCACCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATGCATTTGTTTATGTACACCTCACTCAGGTTTCAACTCAGGTTGCATGGCCTTAACTTATGTATGGAATACTATGTGATAAGTGCGTGTGTAACAGTATATAAAGTATACTAATGTACTGGTGTGAAGGCATTTGGGCAGCGGTCAAATACTTTTAAGTActacttcattttttttttgggggggggggggggtatctgttcattactatttatatttttggcaacttttacttttacttcactacattccgaaagaaaataatgtactactttttactccatacaatttccctgacacccaaaaggaCTTGTTACATgttgacaggaaaattgtccaattcacacacttgtcaagagaacatccctactgcatctgatctggcagactcactaaacacaaatgcttagtttgtaaatgatgcctgagtgttggagtgtgcccctggctatcagtcaataaaaaaagagag
>TU823541
CCAGCCGGAGCCGGgaccgatcaaacatctctggagagaccagaaaatagctgtgaagcaacgctccccatccaacctgacagagcttgaaaggatctgcagagaggaatgggagaaactccccaaatacaggtgtgccaagcttgtagtgtcatacccaagaagactcgagcatcagtagaacacgcctgactctcctccaccagtcaaacccaagaagaatggtctaatgcctcccatcaaaaagagagctggcccatgcaagcaaaggcagcagcgcagtcatcaacGACAgtacatgcaccatttcttcaccaactaCGAAATTGGGGAAATACGTGTGCACCTGAATTGCGAGTGCACCTGAATTGCGATaactgcagtggccaaaacaataacaagtttgtgctctggtattgtgCCTGGCGGACAATGCACAAGCTCCACCGCAgtctggaccttcacttcctgatcacaggccacaccaagtttGCCCCCGACTGGTGCTTCGGCCTCATCAAGCAGCGCTTCAGAAAGAACAGAGTGAACActgtctgagattgctggtgttgtgaaggacagcactgtgacaggggtcaacatcccacagctggttggactggaggatggtacggtgctggtggaaagctacGGCTGGCAACAACACTCCGTACTTCAGGCCgctgccacagatcaagcagtaccagcacttcagctttgtaGCCTGGTGTTGTCGCCAAGGAGATTTCGGACTgtcgggaccaggtttcagctgctgcgcaacgctgacatccttcctcccatagatgacatccttcctcccatagtCTCCCATAGACCTGTACAAGCACGACCTGaactggacacagctagacaaacttatatttttgagaagatcagggagttttgcaactaagtcaagggcaggacagaaacaggctccccgaatatagattcccttgttcatTCGTGGTTCGGacggaccagtcatcagcactatctgcagtgcctctattcaaatgactctctcctaacacgTAAGTTGTTGCTACACTTTTTTTTgttatcctgctgctcagccactttacccctgatttTATGCATATACAGTAACTACATCGTCCATCACTGATAtcgttattgatattgttcttgtacatactgtatagttGATTTTGACGTGATCTATTTCTGATATTGCGattatgcaagtaaccatttggctgtacCGTTTAAACattctgtagagacccatccacttagcaagaCTTCTAAATATAAAATGAATATTGATATGTGTGGACGTAACATGATTTTGTGACATACCACAACAATATCAAGTGTCCACCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATGCATTTGTTTATGTACACCTCACTCAGGTTTCAACTCAGGTTGCATGGCCTTAACTTATGTATGGAATACTATGTGATAAGTGCGTGTGTAACAGTATATAAAGTATACTAATGTACTGGTGTGAAGGCATTTGGGCAGCGGTCAAATACTTTTAAGTActacttcattttttttttgggggggggggggggtatctgttcattactatttatatttttggcaacttttacttttacttcactacattccgaaagaaaataatgtactactttttactccatacaatttccctgacacccaaaaggaCTTGTTACATgttgacaggaaaattgtccaattcacacacttgtcaagagaacatccctactgcatctgatctggcagactcactaaacacaaatgcttagtttgtaaatgatgcctgagtgttggagtgtgcccctggctatcagtcaataaaaaaagagag
>TU823545
CCAGCCGGAGCCGGgaccgatcaaacatctctggagagaccagaaaatagctgtgaagcaacgctccccatccaacctgacagagcttgaaaggatctgcagagaggaatgggagaaactccccaaatacagcatcagtagaacacgcctgactctcctccaccagtcaaacccaagaagaatggtctaatgcctcccatcaaaaagagagctggcccatgcaagcaaaggcagcagcgcagtcatcaacGACAgtacatgcaccatttcttcaccaactaCGAAATTGGGGAAATACGTGTGCACCTGAATTGCGAGTGCACCTGAATTGCGATaactgcagtggccaaaacaataacaagtttgtgctctggtattgtgCCTGGCGGACAATGCACAAGCTCCACCGCAgtctggaccttcacttcctgatcacaggccacaccaagtttGCCCCCGACTGGTGCTTCGGCCTCATCAAGCAGCGCTTCAGAAAGAACAGAGTGAACActgtctgagattgctggtgttgtgaaggacagcactgtgacaggggtcaacatcccacagctggttggactggaggatggtacggtgctggtggaaagctacGGCTGGCAACAACACTCCGTACTTCAGGCCgctgccacagatcaagcagtaccagcacttcagctttgtaGCCTGGTGTTGTCGCCAAGGAGATTTCGGACTgtcgggaccaggtttcagctgctgcgcaacgctgacatccttcctcccatagatgacatccttcctcccatagtCTCCCATAGACCTGTACAAGCACGACCTGaactggacacagctagacaaacttatatttttgagaagatcagggagttttgcaactaagtcaagggcaggacagaaacaggctccccgaatatagattcccttgttcatTCGTGGTTCGGacggaccagtcatcagcactatctgcagtgcctctattcaaatgactctctcctaacacgTAAGTTGTTGCTACACTTTTTTTTgttatcctgctgctcagccactttacccctgatttTATGCATATACAGTAACTACATCGTCCATCACTGATAtcgttattgatattgttcttgtacatactgtatagttGATTTTGACGTGATCTATTTCTGATATTGCGattatgcaagtaaccatttggctgtacCGTTTAAACattctgtagagacccatccacttagcaagaCTTCTAAATATAAAATGAATATTGATATGTGTGGACGTAACATGATTTTGTGACATACCACAACAATATCAAGTGTCCACCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATCCACATAAATATATGGTGAATCCACATAAATATATGGTGAATCCACATAAATATATGGTGCATCCACATAAATATATGGTGCATGCATTTGTTTATGTACACCTCACTCAGGTTTCAACTCAGGTTGCATGGCCTTAACTTATGTATGGAATACTATGTGATAAGTGCGTGTGTAACAGTATATAAAGTATACTAATGTACTGGTGTGAAGGCATTTGGGCAGCGGTCAAATACTTTTAAGTActacttcattttttttttgggggggggggggggtatctgttcattactatttatatttttggcaacttttacttttacttcactacattccgaaagaaaataatgtactactttttactccatacaatttccctgacacccaaaaggaCTTGTTACATgttgacaggaaaattgtccaattcacacacttgtcaagagaacatccctactgcatctgatctggcagactcactaaacacaaatgcttagtttgtaaatgatgcctgagtgttggagtgtgcccctggctatcagtcaataaaaaaagagag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604981 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU823540 False 5204 lncRNA 0.41 2 56120203 56125531
TU823541 False 2174 TUCP 0.43 3 56120203 56128288
TU823545 True 2134 lncRNA 0.43 3 56120203 56128288

Neighbor

gene id symbol gene type direction distance location
LOC110530179 LOC106568900 coding downstream 223861 55872953 ~ 55896342 (-)
LOC110530178 LOC106568902 coding downstream 280862 55815384 ~ 55839341 (-)
LOC110530176 LOC106568901 coding downstream 305275 55799908 ~ 55814928 (-)
LOC110530175 LOC106569017 coding downstream 346030 55769426 ~ 55774173 (-)
LOC110530174 LOC106568905 coding downstream 356150 55730434 ~ 55764053 (-)
LOC110530183 LOC106568896 coding upstream 146803 56275091 ~ 56294377 (-)
LOC110530186 tm56b coding upstream 246300 56374588 ~ 56386555 (-)
LOC110530191 LOC106568892 coding upstream 341853 56470141 ~ 56486904 (-)
LOC110530189 LOC106568891 coding upstream 377007 56505295 ~ 56522597 (-)
LOC110530192 LOC106568888 coding upstream 394605 56522893 ~ 56526802 (-)
G724760 NA non-coding downstream 11794 56108193 ~ 56108409 (-)
G724756 NA non-coding downstream 13339 56106595 ~ 56106864 (-)
G724665 NA non-coding downstream 141758 55977933 ~ 55978445 (-)
G724617 NA non-coding downstream 210133 55909708 ~ 55910070 (-)
G724610 NA non-coding downstream 220974 55899012 ~ 55899229 (-)
G724978 NA non-coding upstream 41792 56170080 ~ 56183166 (-)
G724929 NA non-coding upstream 62489 56190777 ~ 56245802 (-)
G725005 NA non-coding upstream 83685 56211973 ~ 56212848 (-)
G725000 NA non-coding upstream 120819 56249107 ~ 56252439 (-)
G725038 NA non-coding upstream 144006 56272294 ~ 56272996 (-)
G724400 NA other downstream 328718 55785517 ~ 55791485 (-)
G724287 LOC106568908 other downstream 474189 55635538 ~ 55646014 (-)
G723966 NA other downstream 723318 55396624 ~ 55396885 (-)
G723955 NA other downstream 742427 55377281 ~ 55377776 (-)
G722864 LOC106581475 other downstream 1838225 54281685 ~ 54281978 (-)
G725007 LOC106568897 other upstream 91228 56219516 ~ 56232939 (-)
G725280 LOC106568997 other upstream 460055 56588343 ~ 56589271 (-)
penka LOC106569009 other upstream 701353 56828799 ~ 56840147 (-)
G726496 NA other upstream 1007853 57136141 ~ 57137113 (-)

Expression


Co-expression Network