G725007 (LOC106568897)


Basic Information

Item Value
gene id G725007
gene name LOC106568897
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56219516 ~ 56232939 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU823623
ctagtatACACACAGGGGCTTTACACCGACAGACTTGAACACACGATAGCGGACTGTAGCTGTAAGGTAATAGCACTGCTTACAAGACaaagtgtttgagtgtgtgggtgcgtgttACTTACCAGACACTCCTCCGTAGGTGGTGCGCTTGCCCTTGCCGATGCCAGGCCAGGGGGTGCTGTCAGCTTTTAGGCCCATCATTCCAGACACTGTGTTGGTGGCAGTGACTCCATCTGCCCCTCCTTCGTGTGCAGCCTTCGCAATGTCCACGATGTTGGTGACGTTGGGCGTGAGCTTGGCGAAGAAGGGGATCTTGGCGGTCTGTCTCACCCACCGACAGATGTTCATCACCATCACAGGATCCTGTCCACAGGCCAGTCCCATGCCCCTTTCTCCCATTCCATGGGGACAGGAAAGGTTGAGCTCCAGTGCATCCGCCCCGGAGTCCtagacagaaaaacacacacacaaccatcagCTGCGTCTGCATCGATGTCAATGGGACATTCAGAGACAATTCGACTTAAGAGTGGAGATTAGGGTTCTCCCTGATGTGATTTCTCTGTGATAAAAGGAAACAAGGGAACATCCCAGCTCGGTTCCCAAGAGTAGTTTTGAGTACATTTTACTGTGACATGTTAAAATCTTCGCATAGCATAAATGATGACTACCGAACATAACAGTTCTCAAGTACCTGTCATGCCATCTGCAAAGAGACAAGTAAAGAAACGACACGACACATCTACATTAGTACCAATGGCGACAGAAATAAAAAACACTGCATGCATGAGCACGGGGATACCGcagaaaaacacatttcaaaGACAGACTCAACTGAGATGCGAACCGAGCATTGCAAAGGGAAAACGAGAGCCTAacacctttttaaaaaaaaaacactcttaAAATAGCTGTGGAAACTTGTTGTTGACACGTCAAAGAAGCTATAAAATAATGGTGCTGGTGGATGGGATGGGAGAGGAAAAATGGGTAGCGGTGGTTCATGGGAGGAAGGAGAGTAAGAAATAAGGCATTCAACAGGCAATTACACTGTGGAGAAGCGTTCTGACAATGAATCAAAATGGCGGAAGCATCGGTACGATTTCCAGAGACCCTTTATTTCTCAGTCCCATCCAGCATGCTTGCAGAATGTCAGGCCAGCACAATCTATGGCCTTCCTCACAACTGACAGCCATTAGAGAGCAAGAATGAATAATAAGGGTTTTAGCCGTTCtaaaggagaagggagagagagtggttggATAGCTGGGTATAGCTATTTATCATAGTCAGCTTTCAGGAGAGGTGGGGTGGGGGGCATGTTGGTCGTATGGACCTCAAACTAAACTCCATGGTTAATTAAGCTAAATGGATGGGAGAGGGGAATGTAATTGAGCCAaaaagcagaggagagaggacagtttTCCTAAAAGGGGCTGGCGGATTTCCTAAAAGCGTGCTTTCATCTTTCTCTGTGGGGGAGGGCCTATTTTTGAAAACGGAGGGCAATGAGTAACAAAGTCTGTATACCTGTGGGTCATCGTTCAGGCAAACATAAAACATTGACTGTTCTTATGGACTTGCTCATGCCAAAAAGAATTGTGTGAAAGACAGCATTGCTGCATCATTTGATCGCCTGCCACCCCTAACATTTCCACATACACTAAGTCATTAATGTTGACTA

Function

NR:

description
dihydropyrimidine dehydrogenase [NADP(+)]-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU823623 True 1684 TUCP 0.47 3 56219516 56232939

Neighbor

gene id symbol gene type direction distance location
LOC110530179 LOC106568900 coding downstream 323174 55872953 ~ 55896342 (-)
LOC110530178 LOC106568902 coding downstream 380175 55815384 ~ 55839341 (-)
LOC110530176 LOC106568901 coding downstream 404588 55799908 ~ 55814928 (-)
LOC110530175 LOC106569017 coding downstream 445343 55769426 ~ 55774173 (-)
LOC110530174 LOC106568905 coding downstream 455463 55730434 ~ 55764053 (-)
LOC110530183 LOC106568896 coding upstream 42152 56275091 ~ 56294377 (-)
LOC110530186 tm56b coding upstream 141649 56374588 ~ 56386555 (-)
LOC110530191 LOC106568892 coding upstream 237202 56470141 ~ 56486904 (-)
LOC110530189 LOC106568891 coding upstream 272356 56505295 ~ 56522597 (-)
LOC110530192 LOC106568888 coding upstream 289954 56522893 ~ 56526802 (-)
G725005 NA non-coding downstream 6668 56211973 ~ 56212848 (-)
G724930 NA non-coding downstream 18766 56109205 ~ 56200750 (-)
G724978 NA non-coding downstream 36350 56170080 ~ 56183166 (-)
G724943 LOC106604981 non-coding downstream 91228 56120203 ~ 56128288 (-)
G724760 NA non-coding downstream 111107 56108193 ~ 56108409 (-)
G725000 NA non-coding upstream 16168 56249107 ~ 56252439 (-)
G725038 NA non-coding upstream 39355 56272294 ~ 56272996 (-)
G725062 NA non-coding upstream 95723 56328662 ~ 56328919 (-)
G725065 NA non-coding upstream 97373 56330312 ~ 56330584 (-)
G725068 NA non-coding upstream 104787 56337726 ~ 56366731 (-)
G724400 NA other downstream 428031 55785517 ~ 55791485 (-)
G724287 LOC106568908 other downstream 573502 55635538 ~ 55646014 (-)
G723966 NA other downstream 822631 55396624 ~ 55396885 (-)
G723955 NA other downstream 841740 55377281 ~ 55377776 (-)
G725280 LOC106568997 other upstream 355404 56588343 ~ 56589271 (-)
penka LOC106569009 other upstream 596702 56828799 ~ 56840147 (-)
G726496 NA other upstream 903202 57136141 ~ 57137113 (-)
chd7 LOC106599585 other upstream 1053577 57224058 ~ 57305576 (-)

Expression


Co-expression Network