Gene
RNA
| Item | Value |
|---|---|
| gene id | G725230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 56491288 ~ 56491545 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histone deacetylase complex subunit SAP130-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU823893 | True | 258 | lncRNA | 0.63 | 1 | 56491288 | 56491545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530191 | LOC106568892 | coding | downstream | 4384 | 56470141 ~ 56486904 (-) |
| LOC110530186 | tm56b | coding | downstream | 104733 | 56374588 ~ 56386555 (-) |
| LOC110530183 | LOC106568896 | coding | downstream | 196911 | 56275091 ~ 56294377 (-) |
| LOC110530179 | LOC106568900 | coding | downstream | 594946 | 55872953 ~ 55896342 (-) |
| LOC110530178 | LOC106568902 | coding | downstream | 651947 | 55815384 ~ 55839341 (-) |
| LOC110530189 | LOC106568891 | coding | upstream | 13750 | 56505295 ~ 56522597 (-) |
| LOC110530192 | LOC106568888 | coding | upstream | 31348 | 56522893 ~ 56526802 (-) |
| LOC118965616 | NA | coding | upstream | 48251 | 56539796 ~ 56541485 (-) |
| LOC110530193 | NA | coding | upstream | 53399 | 56544944 ~ 56550688 (-) |
| LOC118965677 | NA | coding | upstream | 56434 | 56547979 ~ 56548051 (-) |
| G725223 | NA | non-coding | downstream | 29767 | 56461279 ~ 56461521 (-) |
| G725115 | NA | non-coding | downstream | 59242 | 56431586 ~ 56432046 (-) |
| G725081 | cnn3 | non-coding | downstream | 66707 | 56423039 ~ 56424581 (-) |
| G725100 | NA | non-coding | downstream | 88829 | 56402127 ~ 56402459 (-) |
| G725231 | LOC106568889 | non-coding | upstream | 749 | 56492294 ~ 56492511 (-) |
| G725232 | LOC106568889 | non-coding | upstream | 1136 | 56492681 ~ 56492916 (-) |
| G725233 | LOC105007163 | non-coding | upstream | 3389 | 56494934 ~ 56495202 (-) |
| G725236 | NA | non-coding | upstream | 6367 | 56497912 ~ 56498148 (-) |
| G725237 | LOC106568889 | non-coding | upstream | 7027 | 56498572 ~ 56499236 (-) |
| G725007 | LOC106568897 | other | downstream | 258349 | 56219516 ~ 56232939 (-) |
| G724943 | LOC106604981 | other | downstream | 363000 | 56120203 ~ 56128288 (-) |
| G724400 | NA | other | downstream | 699803 | 55785517 ~ 55791485 (-) |
| G724287 | LOC106568908 | other | downstream | 845274 | 55635538 ~ 55646014 (-) |
| G725280 | LOC106568997 | other | upstream | 96798 | 56588343 ~ 56589271 (-) |
| penka | LOC106569009 | other | upstream | 338096 | 56828799 ~ 56840147 (-) |
| G726496 | NA | other | upstream | 644596 | 57136141 ~ 57137113 (-) |
| chd7 | LOC106599585 | other | upstream | 794971 | 57224058 ~ 57305576 (-) |
| G726885 | NA | other | upstream | 1313843 | 57805388 ~ 57811422 (-) |
