Gene
RNA
| Item | Value |
|---|---|
| gene id | G725238 |
| gene name | LOC106568889 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 56499392 ~ 56500475 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| histone deacetylase complex subunit SAP130-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU823904 | True | 435 | lncRNA | 0.57 | 3 | 56499392 | 56500475 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530191 | LOC106568892 | coding | downstream | 12488 | 56470141 ~ 56486904 (-) |
| LOC110530186 | tm56b | coding | downstream | 112837 | 56374588 ~ 56386555 (-) |
| LOC110530183 | LOC106568896 | coding | downstream | 205015 | 56275091 ~ 56294377 (-) |
| LOC110530179 | LOC106568900 | coding | downstream | 603050 | 55872953 ~ 55896342 (-) |
| LOC110530178 | LOC106568902 | coding | downstream | 660051 | 55815384 ~ 55839341 (-) |
| LOC110530189 | LOC106568891 | coding | upstream | 4820 | 56505295 ~ 56522597 (-) |
| LOC110530192 | LOC106568888 | coding | upstream | 22418 | 56522893 ~ 56526802 (-) |
| LOC118965616 | NA | coding | upstream | 39321 | 56539796 ~ 56541485 (-) |
| LOC110530193 | NA | coding | upstream | 44469 | 56544944 ~ 56550688 (-) |
| LOC118965677 | NA | coding | upstream | 47504 | 56547979 ~ 56548051 (-) |
| G725237 | LOC106568889 | non-coding | downstream | 156 | 56498572 ~ 56499236 (-) |
| G725236 | NA | non-coding | downstream | 1244 | 56497912 ~ 56498148 (-) |
| G725233 | LOC105007163 | non-coding | downstream | 4190 | 56494934 ~ 56495202 (-) |
| G725232 | LOC106568889 | non-coding | downstream | 6476 | 56492681 ~ 56492916 (-) |
| G725231 | LOC106568889 | non-coding | downstream | 6881 | 56492294 ~ 56492511 (-) |
| G725245 | NA | non-coding | upstream | 27115 | 56527590 ~ 56527810 (-) |
| G725254 | NA | non-coding | upstream | 31987 | 56532462 ~ 56532665 (-) |
| G725257 | NA | non-coding | upstream | 35074 | 56535549 ~ 56535753 (-) |
| G725260 | NA | non-coding | upstream | 36707 | 56537182 ~ 56537402 (-) |
| G725007 | LOC106568897 | other | downstream | 266453 | 56219516 ~ 56232939 (-) |
| G724943 | LOC106604981 | other | downstream | 371104 | 56120203 ~ 56128288 (-) |
| G724400 | NA | other | downstream | 707907 | 55785517 ~ 55791485 (-) |
| G724287 | LOC106568908 | other | downstream | 853378 | 55635538 ~ 55646014 (-) |
| G725280 | LOC106568997 | other | upstream | 87868 | 56588343 ~ 56589271 (-) |
| penka | LOC106569009 | other | upstream | 329166 | 56828799 ~ 56840147 (-) |
| G726496 | NA | other | upstream | 635666 | 57136141 ~ 57137113 (-) |
| chd7 | LOC106599585 | other | upstream | 786041 | 57224058 ~ 57305576 (-) |
| G726885 | NA | other | upstream | 1304913 | 57805388 ~ 57811422 (-) |
