G725280 (LOC106568997)


Basic Information

Item Value
gene id G725280
gene name LOC106568997
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56588343 ~ 56589271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU823957
GGCCCATGAAGGAGTTAAGACAAGATGGTGCTTTAAGCTTTAAGACGATGATTCCCTGAGACCACTTTCATGGATGAGCAAACAAAAAACCATGCAGCCTGGCCAATAACCAAACCATGAGAAGTGTTCTCCTGATGCTGATGCTGTCAATCCCACGCACCCAGTGCCTCTCTTCATGTCCAGCTTCCTGTGTGGTGTGCTCTGACGACGCTGTCATCTGCCACAAGCTCTCCAACTTCATAGAGGCCCCTGAGACCACCAGGGCCCTGATGCTGACCGATGGCGCCATCGTCTCTGTGGACCGCCACTTCCTTTCTGACATGTCCAACATGACCGTGCTGTCCCTGAGCCACAACGCTATCACCACCCTCACCCACGACGCCTTCCAAAATCTCACCATCCTCCACACCCTCCTCCTGGACCACAACCACCTCTCCAGCCAGACCCTGGACAGGGCCACC

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 53

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU823957 True 461 TUCP 0.55 3 56588343 56589271

Neighbor

gene id symbol gene type direction distance location
LOC118965627 NA coding downstream 8897 56576857 ~ 56579645 (-)
LOC110530193 NA coding downstream 37655 56544944 ~ 56550688 (-)
LOC118965678 NA coding downstream 38764 56549500 ~ 56549579 (-)
LOC118965684 NA coding downstream 39011 56549263 ~ 56549332 (-)
LOC118965658 NA coding downstream 39256 56549011 ~ 56549087 (-)
LOC110530945 LOC106568882 coding upstream 80636 56669907 ~ 56763302 (-)
LOC110530198 LOC106568881 coding upstream 194007 56783278 ~ 56793172 (-)
LOC110530946 LOC106568881 coding upstream 225455 56813859 ~ 56827689 (-)
penka LOC106569009 coding upstream 239528 56828799 ~ 56840147 (-)
bpnt2 impad1 coding upstream 281930 56871201 ~ 56881832 (-)
lrrc53 LOC106568997 non-coding downstream 4498 56583026 ~ 56588553 (-)
G725268 NA non-coding downstream 33067 56554346 ~ 56555276 (-)
G725267 NA non-coding downstream 34481 56553580 ~ 56553862 (-)
G725282 NA non-coding upstream 1832 56591103 ~ 56591352 (-)
G725284 NA non-coding upstream 3512 56592783 ~ 56593012 (-)
G725289 NA non-coding upstream 7980 56597251 ~ 56597872 (-)
G725299 NA non-coding upstream 15996 56605267 ~ 56605699 (-)
G725309 NA non-coding upstream 24681 56613952 ~ 56614394 (-)
LOC110530186 tm56b other downstream 201827 56374588 ~ 56386555 (-)
G725007 LOC106568897 other downstream 355404 56219516 ~ 56232939 (-)
G724943 LOC106604981 other downstream 460055 56120203 ~ 56128288 (-)
G724400 NA other downstream 796858 55785517 ~ 55791485 (-)
G724287 LOC106568908 other downstream 942329 55635538 ~ 55646014 (-)
G726496 NA other upstream 546870 57136141 ~ 57137113 (-)
chd7 LOC106599585 other upstream 697245 57224058 ~ 57305576 (-)
G726885 NA other upstream 1216117 57805388 ~ 57811422 (-)
G726900 NA other upstream 1230776 57820047 ~ 57846689 (-)

Expression


Co-expression Network