G725289


Basic Information

Item Value
gene id G725289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56597251 ~ 56597872 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU823966
ggatggatgaacaacattgtagttattccccaatactaacctaattgacagagtgaagagaaggaagcctgtacagagtaaaaatattccaaaacatgcatcctgtttgcaacaaggcaccaaAGTAatcctgcaaaaaatgtggcaaagcaattaactttttgcaCTGAATAAAAAgtattatgtttggggaaaagcatagtggtggctgcatcatgttatgggtataattgtaatcattaaggactggggagtttttcaggataaagaaacggaatggagctaagcacaggcaaaatcctagaggaaaacctggttcagtctgctttccaccagacactgggagatgaattcacctttcagcaggacaataacctaaaacacaaggccaaatctacactggagttgcttaccaagaagacagtgaatgttcccaaGTGGCCGtgttacagttttaacttaactctacttgaaaatctatggcaagacctgaaaatggcaatgatcaatgatcaacaaccaatttgacagagcatgaaagttgtggaaagctcttagagacttacccagaaagggtcacaactgtaatcactgccaaatgtgcttctgcatagtattgact

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU823966 True 622 lncRNA 0.40 1 56597251 56597872

Neighbor

gene id symbol gene type direction distance location
lrrc53 LOC106568997 coding downstream 8698 56583026 ~ 56588553 (-)
LOC118965627 NA coding downstream 17805 56576857 ~ 56579645 (-)
LOC118965678 NA coding downstream 47672 56549500 ~ 56549579 (-)
LOC118965684 NA coding downstream 47919 56549263 ~ 56549332 (-)
LOC118965658 NA coding downstream 48164 56549011 ~ 56549087 (-)
LOC110530945 LOC106568882 coding upstream 72035 56669907 ~ 56763302 (-)
LOC110530198 LOC106568881 coding upstream 185406 56783278 ~ 56793172 (-)
LOC110530946 LOC106568881 coding upstream 216854 56813859 ~ 56827689 (-)
penka LOC106569009 coding upstream 230927 56828799 ~ 56840147 (-)
bpnt2 impad1 coding upstream 273329 56871201 ~ 56881832 (-)
G725284 NA non-coding downstream 4239 56592783 ~ 56593012 (-)
G725282 NA non-coding downstream 5899 56591103 ~ 56591352 (-)
G725268 NA non-coding downstream 41975 56554346 ~ 56555276 (-)
G725299 NA non-coding upstream 7395 56605267 ~ 56605699 (-)
G725309 NA non-coding upstream 16080 56613952 ~ 56614394 (-)
G725311 NA non-coding upstream 17242 56615114 ~ 56615433 (-)
G725321 NA non-coding upstream 26808 56624680 ~ 56625152 (-)
G725329 NA non-coding upstream 33117 56630989 ~ 56631245 (-)
G725280 LOC106568997 other downstream 7980 56588343 ~ 56589271 (-)
LOC110530186 tm56b other downstream 210735 56374588 ~ 56386555 (-)
G725007 LOC106568897 other downstream 364312 56219516 ~ 56232939 (-)
G724943 LOC106604981 other downstream 468963 56120203 ~ 56128288 (-)
G724400 NA other downstream 805766 55785517 ~ 55791485 (-)
G726496 NA other upstream 538269 57136141 ~ 57137113 (-)
chd7 LOC106599585 other upstream 688644 57224058 ~ 57305576 (-)
G726885 NA other upstream 1207516 57805388 ~ 57811422 (-)
G726900 NA other upstream 1222175 57820047 ~ 57846689 (-)

Expression


Co-expression Network