G726521


Basic Information

Item Value
gene id G726521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57125014 ~ 57130518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU825353
ACCTTCCAGAATCCAGCAACTTTATTAACAAAGAACAAGCACATAGCTGATCCTTTCAAATCCACTTCTCCACCAAATGCAAAATAAATCATTGTCTAATTCTACAAATATCTTGTCTAGCGACTTTAAATAAAGCTATATTTTCTGATGTAAATTAACACAAAACTAAACCACATCGGAAACTAAGCTTACAGCACCTTGCCATCCTCTTGGCGCCTTTCCTTGTCCAGTTCATACTTCTATAGAGGACAGCATTATGATTTTTACCACAAGCAGGAAGTGGCTAAAACACTATGCACTATACATTGCGGAAATGGCTGTCCTGCACAGTATGGGGTTTCCTACTCCCATTCGCAGGGGTCTGTCACTGGAGACCTCTCACAGGTGGTGTTTCTCCTGAATCTTTTAACATCTGTGTCAGCAGAGGGAGTGAAAGATCACCGACATCAGTGCAGGTGTGAAGAGTTTAGCATCATTTCCGGACCCCCTTATCAGACATCTTGAGCTTTTTAGCAGCAGCTTTGGGGGACTCTTTATTTTTGGCGTCTTTGGGGACCTCCACCCTCTTACCCTTCACCTCTTTCACTGACTTCTTGTCTGGCTTTGTCGCATTCTTCTTAGCTTTCTTGCCCTGCTCCTGTTTCttattttctccctctttcttattttctccctccttctctttgtctctcctaaTCTTGCCCAAGGCCTTCTTAAACTCCCCCTTCTCTGGCTTGTCCTCCATCCTAGCTGCCGTTGCCACCTTAGCCTTCTTTGCCACCTCGTCCCTCGTCACCCCTAGgaccttctccttctccctggcCAGGATGTTCCTCACCTCGGCCAGCGCCATCTTGGCAATCTTTTTGGCCTCCAATCGCTCATGGATGATGGCCAGCTGCTGGTTCAGGGCCTCCCTCAGCTTCCAGCCCACGTCTTTGGTAAGAGGGTTTTCTTTTTTTGGCTTTTCTCTTGGAAACATGTCCTGGATTTTCATCTGAGGTTTAGAAAAACAAATAGTTAAAATATGGATATAGTCTCAGTAAGACTGGTGTATCTGCTTGGTGCTCAACTGCCAATATGAACAGCCGAATCGCAGAGCTTGCCTATAGTAGGGGAGAGCAACCGTTACAACAGAACAAAACCAGGCTCAACCAATAACAGATGGAGGGAAGTCTTGTACCTCTCTCAGCTTTCATTGACACCCGTGGCAAGCTCACTCATGGATGGGGCTAAGATTTTCTCTCACAATCTAATAGTAAAGCTTTTGACATAGAGCTTTCGGGAGTATTGGTAGTAATAATGCAGGCAGAATCTACTTGGGCCACCCCTCGTCTGGCATTGCCAAATAGTGGCTGCGGGTGAAGTCACGAAATCAGGGGCAAATTCAGTACGAATTAACAAAACTAAAAACCAGCCAGACCTCAAACAGATTCTAagttacagcccccccccccccaaaaaaaaactaaatgtgcatGTTGATAACATGGTAAAGCAGACAAAACGCTTCAACACATGTTGAGAGCATGGACTAGACTACAAAGCAATCTGGACATTCATCCACAACAAAGTACCTTTGGTCTCAGTAGCCGCCTCTTTTTTCTTGACCTTTGTTTTTGGAGATTCTGGTTCGATTAAGCTGGCTaagaagataaaaaaaaaaaaactatgacCACCAACATAAATCAACACTAACCTACCAATGTTCTATTTCAAAACTTTAGCAGAATATACAGGTTTCTTTAACTAGCAGACCTGCTTTCCATGAATGGAATGCCATGCATCCACGCATCTGAAAATTGACATGTGGCGTAGTCGGCTACTCAGAGCTGCTTGAAGTTTTGCTCTCAGCAGAGAGAATTTAAAAAAAGGGGAGCAGGTGAAGTACCTCTGTGTCTCGCTCTTTTCCGATCGGGTCGAGGTTCATCTGATATTTTTCAAAAGGAACATGGCATTAGAATCTAACAATGACCATTACTTACTGTGACCATTACTAATGAACACCAGGCAAAACTAATATCCAAAAATGACCAGAACTAAATTTGACAACTCAAAACATGCCCATGCCAAACCCCAAAGGCGGACGGACAGATGCTACCATTCAGGGCTCTACGCTGACCATTTTTACAAGCAGCATGTGCGCCTAAGTTGAACAATGTAGGAACACACCAGGAAATTTGGGAGCACAATCCAAAATATTTTGAGGtaataaagctagaatccttcatTTTTCTAGGCGCACTGGTGCTCCTAAATACAATTCCAGGTCTTacagcaaaatatttaggtgCAAAATACAAGTAAAATGGTCACACTGTGGACCCCTGCCACACATTCACGATTGCATGTGTTTACCCGTACCTCCTATTCTGATGGTTTTATTACACTACTTGTAAGAGTATGACTTGGAAATGATGACCATGTGAGAGTGACATTACTGTATAACTAATTTTACACTTTATCAATACATTTGGAATCATATTTGTCACTGGTGCCAAAGACCAATCATCATCAAAGCCCAAACAATAGATGGGTAGTTGCAATGGAAATATGTAAGATTAGTAAAGTTCATATTCAGTTTAGAGTGATTAACAAAATGTTtagcaaatgtatatatttttcccTTTCTGTAATACACATGATATCCAGTGTTCTGTTTTTAACACACTGGTTGGTCACATGTTATGGATTAAACTCATATCTGTTGATAGTGATTGGAGGTACAAGGACCGAGGACACTGATTATTATTGTATTCTGTGAAACAATGATTCTGTAGCAGCTGACAAAGTCACTGACTTTTAGTTTTTTACTTCCTACAAGCGTCTTGGGCTGGTGTTGTCTCCATGTTGCAACTTGTattaaatcaaattgatttatgaTTGACTTTATCTGCGACTGCTCTTCTTTTGTTCACAATCAAAAGGGGCGACAacaccagcccagcccagtccacAATCAAAAGGGGCGTCAAAGCACCATTTGTACAATGGCCATCCAGGAGTCACTGGTTGTGCGCATACTCCACTTGCCTCTTCGCCAGCCCCGACGACTTAAAAAGCAACATCAAGTCCTTCAGGGCTTGTTTGACAGGGTAATGCTAATAACCCAAAAGGCCACGCAACATGACCACACCTCACCAATTGGGTCACTTGTCTAGTTCTATTTTAAAATGGGCAGTTAAGTATGACATGACCCGCTTGAGCTGCGGCGACATAATCTACTACAGCCACTATGACTTATTTTCACACGAGAGCATGAATCTCACCAGTTCAACCTGTTCCTAGCTATACGGTCAATGCTTGGTCATTGTACTTGAGTACTAAGTCAAGCCTCTAAATGAGTGAAAGCCAATACGAAATCCGAATGGATTCCACCCAAAAGCTTGCTCGGCAGGTTTATTGTATCTTTGACAGTGCCATTCCTTATACCTTTTGTGCCAGACATGTGTTTGCTAGTACTTACAAGAAACCTGTCTTCGTTTGCTTTCAATGTTGTCATAGACAACACGTTTTTGACCATACATACCATTACAAATGACTTGAATTTCTTGAGTTCCATCTATAGACCACAATGTTTAGAGTTTGAAATCTAAACTAGCTGGGTAAGTCTCTTTAGGGCGAGTGGGAGTCAGCATTGACCCATTTCAGAGATCTGGGGTTCAGGTTATGATCTGCGTCTCAAAGCAGGTAAAAGGTCCACGGAGGGTGGAATTCGGTAAAAGTCCTTGAACTCATAGTCGGGCTCAAAAAGCATGGAATCCTCCACATCAGGGAGCACATTTTTCCAAAACCACCTCGGGCTAAGTATGCAACATCATATTTCCTAACCCTGTCCCAGGACGTCTAGAAAATTGGTTTAAGGAACAGTCGAAAGCTAGTTTCTCAAAGGGTTGGCTTTAACAAAAGTGGACAGCTAACAAGAAATGATTAACACCTGTGCAGTGCTCCAGCAAGCCGGTCTCTAAATATCTTATGTGCAAAGtttcaaccccccaaaaatctatacTTTACCATGCAAGGGAAAAAAAAGAACATTCACAAAATAAAACACATAAACCTTAGCGAATAAATCATCTGAAAAACACGTTTTTAATTGTGTTTAACGAATGGATGACGAAGACAGGGATTGGGGACAAATAGCAGACCTGAATACGTCCAAAAACCAACAAACACAGAACATGAATAGTAATCCTAATATGGACAACAGAAAAATAAACATGATAATGAGGGAATGCTTCACTGATAAAGAAAAATTATAATCTTCCACAAAACTTTCAATAAAGCAAAAACTTAGACGAAAGGTCAAACCAAAGTAAAAAAGTATAAATATAATTCCTGCTAAGTGGATAAAAATGTGCGAACGTTAGGGCCCTAGGGCATGCAGTACTGTGGTTGGAAAAAAGAGAGCCGATCTGTTACCCAAGTGCAGCTGTTCATTGCAGAAAATCGGGTGTTTGCAGTCTGTTAAGTGGAAATGCACATCATAGAAAAGCTGGCTGGCATTTAAAACTGCTGCAAAAATCCTGAAGGCATAGTCTTCGCCCCACCATCAAAAATCTTCAAAAAAAGACTTGAGGGGTCAACATCTACACGACTTAACCCTTCAAATTATTCTTCCAGGGAATGGTGATGTTTACGGGGTGTTTTTCAACAAACGCACCTCAAGCAATGGGAAACAAGTCTAAAGAAGCAACAAGTCCACTTGGGACTTCATGCCACGGGGGATATGGCTACTGGTTATGGTAAGCAAGGCCTACTGGTTATGGAGGCCTAAGATCACACAACTCTTTCCCTGAACCCCGTCAGTCTGAGAAGTGCCAGCACTTTCCTCCTCCGCCGCTCCATCCTCATCCTCAAACGGGTTTATGAGGCCATAGAGGAAGGTGAAGAAGCCTTGAAACCAATCGGAGCCCTCCTCCACTAACATATCCGGGACCTCCTCGAGGGAGTCCGACCTTTCCTGACTGCCATCTTTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU825353 True 4980 lncRNA 0.42 2 57125014 57130518

Neighbor

gene id symbol gene type direction distance location
LOC110530205 LOC106568875 coding downstream 93340 57008139 ~ 57031674 (-)
LOC110530203 LOC106568877 coding downstream 178224 56896586 ~ 56946790 (-)
bpnt2 impad1 coding downstream 243182 56871201 ~ 56881832 (-)
penka LOC106569009 coding downstream 284867 56828799 ~ 56840147 (-)
LOC110530946 LOC106568881 coding downstream 297325 56813859 ~ 56827689 (-)
LOC110530209 NA coding upstream 10461 57139075 ~ 57146180 (-)
LOC110530210 LOC106595335 coding upstream 45353 57175871 ~ 57180428 (-)
chd7 LOC106599585 coding upstream 93540 57224058 ~ 57305576 (-)
LOC110530212 rab2a coding upstream 176897 57307415 ~ 57325324 (-)
LOC110530214 LOC106568870 coding upstream 354723 57485241 ~ 57511592 (-)
G726453 NA non-coding downstream 102603 57021681 ~ 57022411 (-)
G726429 NA non-coding downstream 134678 56989964 ~ 56990336 (-)
G726430 NA non-coding downstream 135244 56989121 ~ 56989770 (-)
G726404 NA non-coding downstream 172835 56951973 ~ 56952179 (-)
G726403 NA non-coding downstream 173140 56951675 ~ 56951874 (-)
G726598 NA non-coding upstream 164106 57294624 ~ 57361794 (-)
G726625 NA non-coding upstream 235596 57366114 ~ 57366350 (-)
G726639 NA non-coding upstream 264759 57395277 ~ 57395557 (-)
G726644 NA non-coding upstream 277434 57407952 ~ 57408222 (-)
G725280 LOC106568997 other downstream 535743 56588343 ~ 56589271 (-)
LOC110530186 tm56b other downstream 738498 56374588 ~ 56386555 (-)
G725007 LOC106568897 other downstream 892075 56219516 ~ 56232939 (-)
G724943 LOC106604981 other downstream 996726 56120203 ~ 56128288 (-)
G726496 NA other upstream 5623 57136141 ~ 57137113 (-)
G726885 NA other upstream 674870 57805388 ~ 57811422 (-)
G726900 NA other upstream 689529 57820047 ~ 57846689 (-)
LOC110530228 LOC106569007 other upstream 732220 57858233 ~ 57864165 (-)

Expression


Co-expression Network