G726747 (LOC106568867)


Basic Information

Item Value
gene id G726747
gene name LOC106568867
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57563937 ~ 57572374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU825605
AATTTAAGTAACTTTATTATTTAGTATTTTATAATACATTCAGTTCAAGAACAGTCTACCAAGCTTGACTAAAAACAAGGCAAAAAATACAAGTGAGTTGTGTGGCATTGTTTTATGAACCCATCTGAGGGACTGGGACTAGTGGGGCAGATACAAAAGTCATGTATAGAACTGCCAACTTGTTTGGCAAAGGGAGTCAATAGTTGAAATTCTATACATTGCATTTTTATCTGTAACATTCTAAAATGTTGCACCCTCTTGAATAAGCCCCAGTTGTATGGGCCACCTTCACTCTGCAGGTGGGAATATACATTTTCCCCTAACCACTGATAGGGGGGTCATTACACTATTAAAGTTCAAATCTGATTGGGGGTACAGAAGGgttaactgatcctagatctgtggttaggggcaAATTCTGAGCCCGTTGGTCCATTGATTGGCAATAGTAAGGTCCTGAGCAATGTGGTTAAAAGTGGTTTACACCACAAACACTCCTTCCCTTCTACATACCTTAACTCAGACACACTCCACTGATCCAGGTTAATAGGTCATAGGAGCCCATTTCTGTTCACAAACAGTTCACTTCTGTTAAACTTTCCCTGTAAGTGTTCAACTGTAGGTGACTCCATACATGCATGGGCTATTGACTTAGAAATATCATAACAGATTGTCATATTTGTCTTTACATTATCTTAAAACATTTGAGGGTCATGGCCTGAAAAGAAAGAAGCGCTGAATACCACCATCACTGAACGTTAGTTGCATttcacagcagcaagattgaCATATGGATTAACAGCTCAGACTGCAGATTCATTTGAATTAGGATGTTGAGTCAGTCTAAGAATTAGATTATTTACAATCAAAAGCAGACGATCTCCTGGGGATGTTTACCGAATGATTACCATTCAAAACAAATATGTTTTATAAGAAATCAATGAAAAAAAACCCTGGTCTGTTCCTTCGGGTGACAATGCATTCAGAACATTTGCCTTATTGGCCTGAGACAGACCAGTTTCAGATAGAGCACAAAGAGTGCGCTTCTTTGATGTGCCAGGGCGTGAATTAAGTTCAAGCCTTCACTTTGAACAAGACACCACGTGCACGAGGCAGTGTCTGTAATGCAGCTGCAATATGCAAGCAGTCCAACATTGTGATGCTCTAAATATCCCTATGGCAAACTAAGTATCATACGGCcacattatttgtatttttttaaacacatttgATCATTTTAAATTctttaatataaaaaaaataagactTTGATATCTGTTGAGTGTAGTAGACCTTCCTAAAAAACCACTCACCCCCCTCTCTGCCAAGTGCAGTGCAATTTCaataacaaagagaaaacagcctgccttcttttttttttatcatccaGACAAAGGCCAATCAGGCAGGGCAATCGTTCCCTACTCCACATGCAAAaggaaaagggaggagagaaggagaaaagagggagggaggacagtggggaaagatggggTCTTTTTGACATCCCTGCAGCCCCCACTCCTACCAGCCCATTTCCAGTCCAATTCTGGGAATAAATTAATAAGCGGTCACACAATAGCATCGGTCAGGtggtgagtgtgagtgagtgtgtacatgcgtgcacgtgtttgtgtgtgagacgtTAAGGAGAAAAGTGATGGTCAGAATGTGTGTATTTAGGTAGACATGTTATACAAAGGGAACCCTTGTCTGTGTGTATCAGTATGTCTGTGGTGAATTAGTGCAGTGAGCGGAGATCCATTTTGCAGTGGCAGGGGAAGGACGGTGAGTGGAAGGTGGGGGACACTGAGGTGGGGGTACGAGATGTGGCACGGTGGGCGTGGGCCAGTTAGAAGCGGATGAAGGTGGCATCGATCTGGCGTACGGTGGGCAGCGCCAGCATGATCTTCCTGCGGTATTGGGGGTCCTTCTGTAAGGGGTTCCTCTCCAGGTACACCGTCTCCAGGGCCTTGGAGCTCTTCAGCTCATCCAGATCTGACCAGTTCTCTATCTGATTATCATTCatCCAGAACTCCTGTAGGTCTGTTAAATGGCTGATGTTTTCAATTTTCTTCACCCGGTTGGCTGCGATGTCCAGAGTTGTCAGCTTTTGTTGTTCTCCAGGCCCTCGATGACCTCGATGCCATTGTGACTCAGGTAGAGCTCCTTCAGGTTGACCAGACCCTGCAGACCCTCCATCTTGGTGATGCGGTTACTctggatgCTAAGGACTGTCAGATTGTGTAGGCCCTCCAGATGCTGAAACTGCGTGATCTTGTTGGTGCCCAGAAACAGACTTGTCAAGGAGGACAGCGAGTCCAAATTCTCAATTACCCGGATGCGGTTAGAGCCCAGCTCCAGCATCTCCAGGCCGGTGAGATGGTCCAAATTGGCGATGTGGCTTATCTTGTTGTGCAGCAGGAATAGCTTCTTCAGCCCCGTCAGACGCTCCAGACCCTCCACCTTCCTCAGAAGATTGAAGGACACGTCCAG

Function

NR:

description
protein phosphatase 1 regulatory subunit 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU825605 True 2496 lncRNA 0.44 5 57563937 57572374

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-13a3.10 LOC106568869 coding downstream 31643 57515189 ~ 57532294 (-)
LOC110530214 LOC106568870 coding downstream 52345 57485241 ~ 57511592 (-)
LOC110530212 rab2a coding downstream 238613 57307415 ~ 57325324 (-)
chd7 LOC106599585 coding downstream 258361 57224058 ~ 57305576 (-)
LOC110530210 LOC106595335 coding downstream 383509 57175871 ~ 57180428 (-)
LOC110530221 LOC106568860 coding upstream 69404 57641778 ~ 57720685 (-)
LOC110530224 LOC106568859 coding upstream 229464 57801838 ~ 57803851 (-)
lpar5a LOC106568857 coding upstream 239169 57811543 ~ 57813057 (-)
LOC110530228 LOC106569007 coding upstream 285859 57858233 ~ 57864165 (-)
snorc LOC106568856 coding upstream 293790 57866164 ~ 57876385 (-)
G726759 NA non-coding downstream 6504 57557121 ~ 57557433 (-)
G726758 NA non-coding downstream 6925 57555972 ~ 57557012 (-)
G726757 NA non-coding downstream 8251 57555053 ~ 57555686 (-)
G726755 NA non-coding downstream 12046 57551503 ~ 57551891 (-)
G726754 NA non-coding downstream 14225 57549416 ~ 57549712 (-)
G726765 NA non-coding upstream 10462 57582836 ~ 57583070 (-)
G726766 NA non-coding upstream 10934 57583308 ~ 57583525 (-)
G726673 NA non-coding upstream 28513 57600887 ~ 57601781 (-)
G726775 NA non-coding upstream 32652 57605026 ~ 57605398 (-)
G726776 NA non-coding upstream 34236 57606610 ~ 57606957 (-)
G726496 NA other downstream 426824 57136141 ~ 57137113 (-)
penka LOC106569009 other downstream 723811 56828799 ~ 56840147 (-)
G725280 LOC106568997 other downstream 974666 56588343 ~ 56589271 (-)
LOC110530186 tm56b other downstream 1177421 56374588 ~ 56386555 (-)
G726885 NA other upstream 233014 57805388 ~ 57811422 (-)
G726900 NA other upstream 247673 57820047 ~ 57846689 (-)
G731764 NA other upstream 4472661 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 4608313 62165849 ~ 62185180 (-)

Expression


Co-expression Network