G726819



Basic Information


Item Value
gene id G726819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57722108 ~ 57722347 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU825679
AGCTTAGACTTTgtaccacacagccactccactgaatagcaggctaatgattcCTTTGCAATAATTAGCCACTAATTCTCGTTCTAACCACACAttggggtggtaggtagcctactggttagagcgttggactagtaactgaaaggttgcaagatcaaatacctgagctaacaaggtaaaaatctgttgttctgcccctgaacaaggcagttaacccactgttcctaggccgtcattgaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU825679 True 240 lncRNA 0.44 1 57722108 57722347

Neighbor


gene id symbol gene type direction distance location
LOC110530221 LOC106568860 coding downstream 1423 57641778 ~ 57720685 (-)
si:dkeyp-13a3.10 LOC106568869 coding downstream 189814 57515189 ~ 57532294 (-)
LOC110530214 LOC106568870 coding downstream 210516 57485241 ~ 57511592 (-)
LOC110530212 rab2a coding downstream 396784 57307415 ~ 57325324 (-)
chd7 LOC106599585 coding downstream 416532 57224058 ~ 57305576 (-)
LOC110530224 LOC106568859 coding upstream 79491 57801838 ~ 57803851 (-)
lpar5a LOC106568857 coding upstream 89196 57811543 ~ 57813057 (-)
LOC110530228 LOC106569007 coding upstream 135886 57858233 ~ 57864165 (-)
snorc LOC106568856 coding upstream 143817 57866164 ~ 57876385 (-)
LOC110530229 LOC106568854 coding upstream 154450 57876797 ~ 57910140 (-)
G726801 NA non-coding downstream 43451 57677860 ~ 57678657 (-)
G726800 NA non-coding downstream 43791 57664324 ~ 57678317 (-)
G726781 NA non-coding downstream 93915 57627977 ~ 57628193 (-)
G726665 NA non-coding downstream 106091 57615634 ~ 57616017 (-)
G726672 NA non-coding downstream 111346 57610188 ~ 57610762 (-)
G726890 NA non-coding upstream 126910 57849257 ~ 57849704 (-)
G726915 NA non-coding upstream 133806 57856153 ~ 57856353 (-)
G726921 NA non-coding upstream 147086 57869433 ~ 57870062 (-)
G726496 NA other downstream 584995 57136141 ~ 57137113 (-)
penka LOC106569009 other downstream 881982 56828799 ~ 56840147 (-)
G725280 LOC106568997 other downstream 1132837 56588343 ~ 56589271 (-)
LOC110530186 tm56b other downstream 1335592 56374588 ~ 56386555 (-)
G726885 NA other upstream 83041 57805388 ~ 57811422 (-)
G726900 NA other upstream 97700 57820047 ~ 57846689 (-)
G731764 NA other upstream 4322688 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 4458340 62165849 ~ 62185180 (-)

Expression



Co-expression Network