G727364


Basic Information

Item Value
gene id G727364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 58264938 ~ 58268699 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU826275
ggaaagttcttctcttttatttcagctcatgaaacatgggaccaacactttacatgttgcatttatatttttgttcagtatagtttagaGTGAGGCTGGCAAACTCCCTCAAAAAAAGCCCAGAATAAAATGCATTGTTGCCTATTAAACATACAGATTTtttgttgtgtctgtgtgaacCCTGCTTTTCTCTCCTCGACTGCTCTCCTTTCGGTTTGTCCTGTCTTGGAATTTCCCTTCTGCGGGTTGATAAAGTTAATTCATTCGTTCATCAATCACACAAACACCCACCACAAAATGAACATGACACAGGGCATCTTTAAAATCTTACAAGGCATATAATTGACACAAGGTTCCAGGAACAAACAACAGCAAATTACACATATTTATTCAACCTGTTTTTTTCTTGCATCTATCGTCACCATAAACACAAAATCTCCATAGGTTTTTTTTTCTGAAAACAAATAGAACccaaaaaattaaaaattaaattccaatgtttttctttcaaattGGCACCTTTCAGAAATGCCTGCCACATTCAACTCATAAAGGGGAAATAAACATGTCCAGGACCCCTGGTTatatcagacctgggttcgaatactatttgaaatgatttcaaatactttatctgtgcttgattgagctggcctggcttaatggaccaatagaatagtcccaaaactGCAACCCCCATCCATCTGCAAACACAAAGGCAGGGTAGAGCAAACACAAAGtgtttgaaagatttcaaatagtaggTGAACCCAGGTTCAAGTTATACATTATGCTATTTCACCCGTCTCAAACTGCAGCCATCTCAGTGGTCCATATTTATCTGCATACACAAACACTCATCGATAGACGTTCATGGAGTGTCGACTCAATTATCGATCCGTCATCTTGTGATCTCTGATCTCAGTCTTTGTGCAGACAATACCATCTTATCGACTTCCTAGGCCTCTTACGTCATAAAAGTGCAGCGTTTATAAAGAGGGGGGATTTAGAATTATACAGACGAGAGcgggagaggggttagaggaggacaggagagggggatgaaggttgctgggggaggggggtgctGTGCAAATTTTGTTCAGTGGCATTGAGAGGCGTGGCCATTAAAAGTGAGTGAAGTCGGCGTCAGTGAGTGGttaactgtgtttttgcattggaATGTCACTGTGGGGCAGCCACGGGCAGTTCACATGGTACGCTCCAGGGAACCCTATGCCTACTCACATAATAACCTGTTCATCAGATCACTACCCAGTGTCACTATCATAATGCTTGTTTCTAGGCGTTTTCACCTATTCAATACATGTGTTCCGAGACCAAGGTTCATAGTCAGTCCGAGAGGACTCTTAGGTTTTCACCCAACCTTTACTTAATTCTGTTCAATTGAGCCAATTGATTGAATAATGAAGTGCATATCAGATCAATGGAATAGAATTGTGTGAAGGCTGGAAGGAAAAACTGGATGCAAAAACTCCTGACTCCGCCAGGACCGGCTTTGATAACAGCTGCAGTCCTCCTGCGTGAGTGCTCTGAACTCTATGGTTCTGAATGGGGTCATGTTATTTCCTGTGTGTTCCTCCTGAATTCTCCGCATTTTCTGCCTCAGAAGCCGAAGCACAGGCCTAGCGGACGGGTCGCTTAGCTTCCCCGGTTCTGGTGTACAGCCATAGACTGAAGACCCTCAATTATagtgtgtgaccatatctctgGAGCCCTAACTCTCCCCAATCTCCTCATTCATCGCACTTTCGATGTTGGCTATTGACGAGCACAGTCCGTATCAAAACCTCTCCATCTGGCCCTCAGGGGGCCCATTCAGTCTAATGGAAATGTCCGCAACATTGTGTAAGAATCTATGGCTGTTCAATGCTTTCAATATCATGTGGAGTAAAACACAGAATCAGTTCTTATTGCCAAACGTTTCtatccgtttccatcttgtcgaATAAGCCCAAATACACCTTCTTTGTCAAGCGACCACACACGTTTGCAGTAGAATGAAGCACTGTGTCATTGTCAGGAAGCCACGCTGTCACGTCAAAGCTTCAGAGAGCACAGAAGGTCGTCATTTGCGAATGAATAGTATGCCATGAAGGACAGCCTGGGAGGGGGAGATAAAAGAGAGGTGGGAGtgtgagggagaagagggagaagaacgTGGGAGATAAGACGGAATGGAGCTGGGACGCAacggaaaagacagagagaggggggggggggggggGGgaaaaaaactgctgatgcaaagCGCTTTCATTTTCTCACTGTTGTGCCCTGTGATGTTGTGTGGGTTTAACGCTAAGACGTTTTCAGGGTCTTACCAAAACCCCTGGGGCCAGCTTATCCTCCTTAAAACTCATCAATACTTTATTTCACTTGAGTTTGGGGTAGaaacacttttttgccccaaAGATGCTCCAGGGGGTTTGATATTCTGTTTTTAATAAATGATGTCCTCAGACATAAAGACTGTTTAAAAGAGTGGGAAAACAAATGTTTGGCTCAACGTGGCTgaaaagtccccccccccccacacacacagtgtcaaccAAGACTTACATCCTCTATATCGCTATGGTCTATAGACTGACTCTTAACATGTCTTCAGTACAGATATGTTAGAGCACCCAAACACCAGAAAGCAAAACTAAAGAAAAATGTGAAAAGACCAGCTGTAGTGGTGCCGTATAACGTAAAATAAAAGACAAGAACAGAACCCcaaaatctatgaataatataATACTCATTACTCCATTTTTGTTCTGATCTGAGACCAAAAGGAAGTATTTTTCCTTATTTTAGTTTTATTTTGGCAAATTAACTAGGTAAACCCCCGACATcgtctcctcgcctctcctcccacccctcgtCCTGCCCCCCCATGTACCAAACTCAGTCCCGATTGGTGGAATCCCCTGGAATCCCCTGTCAATTACCGCCGGAGCAACAACGTGACCAATGAGAGCAGGTAGAGGGCGATGAAGGGGAGATTGTGGTTGGCTGAGGCTTTCACGACCTTCTTGTTCTCCGGGGGGTAGGCATAGAGTttgggtctgtctgtgtttggGGCCATGAGGCGTGGGCCCCGAGCACAGTTATCGTCAGCGCACATGCCACTTCCTGAACCACTGACATCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU826275 True 3161 lncRNA 0.44 2 58264938 58268699

Neighbor

gene id symbol gene type direction distance location
LOC118965534 NA coding downstream 73942 58182632 ~ 58190996 (-)
trnav-aac-153 NA coding downstream 341644 57923222 ~ 57923294 (-)
trnaw-cca-3 NA coding downstream 343164 57921703 ~ 57921774 (-)
LOC110530229 LOC106568854 coding downstream 354798 57876797 ~ 57910140 (-)
snorc LOC106568856 coding downstream 388553 57866164 ~ 57876385 (-)
LOC110530234 NA coding upstream 207773 58476472 ~ 58477642 (-)
LOC110530949 LOC106568846 coding upstream 842424 59111123 ~ 59146231 (-)
LOC110530239 LOC106568843 coding upstream 945695 59214394 ~ 59248869 (-)
LOC110530238 LOC106568844 coding upstream 981003 59249702 ~ 59279537 (-)
LOC110530240 LOC106568842 coding upstream 1017956 59286655 ~ 59338189 (-)
G727026 NA non-coding downstream 124624 58135332 ~ 58140314 (-)
G726967 NA non-coding downstream 210792 57988734 ~ 58054146 (-)
G726921 NA non-coding downstream 394876 57869433 ~ 57870062 (-)
G727514 NA non-coding upstream 163571 58432270 ~ 58433071 (-)
G727569 NA non-coding upstream 238710 58507409 ~ 58511274 (-)
G727570 NA non-coding upstream 240138 58508837 ~ 58514799 (-)
G727571 NA non-coding upstream 243178 58511877 ~ 58513910 (-)
G727649 NA non-coding upstream 371197 58639896 ~ 58640233 (-)
LOC110530228 LOC106569007 other downstream 401061 57858233 ~ 57864165 (-)
G726900 NA other downstream 418249 57820047 ~ 57846689 (-)
G726885 NA other downstream 453516 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 959412 57224058 ~ 57305576 (-)
G726496 NA other downstream 1127825 57136141 ~ 57137113 (-)
G731764 NA other upstream 3776336 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 3911988 62165849 ~ 62185180 (-)
G735880 NA other upstream 6721602 64990301 ~ 65040241 (-)
G736216 NA other upstream 7249468 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 7832397 66101096 ~ 66101627 (-)

Expression


Co-expression Network