G727569


Basic Information

Item Value
gene id G727569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 58507409 ~ 58511274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU826491
tctaagcttctgtgttctcctctgttctgctctactctcctctgttctcctctcctctcctctactctcctctactctcctctcctctgttctcctctactctcctctgttcttctctactctcctctcctctgttctcctctcctctgttctcctctgatctactctactcacctctgttctcctctcctctacgctcctttttctcctctcctccgttctcctctcctctacgctcctttgttctcctctcctctacgctcctttttctcctctcctctacgtgcctttgttctcctctactctcctctgttctcctctcctctaagctcctttgttctcctctcctctacgatcctttgttctcctctactctcctctgttctcctctcctctatgatCCTttgctctcctctactctcctctgttctcctctcctctatgctcctttgttctcctctactctcctctcatctaagctcctctgctctcctctaagctcctctgttctcctctactctaagctcctctgttctcctctaatctaagctcctctgttctcctctaatctaagctcctctgttctcctctaagcttctctgttctcctctcctctaagctcctctgttctcctctactttCCCatgttctcctctgctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU826491 True 663 lncRNA 0.49 2 58507409 58511274

Neighbor

gene id symbol gene type direction distance location
LOC110530234 NA coding downstream 29767 58476472 ~ 58477642 (-)
LOC118965534 NA coding downstream 316413 58182632 ~ 58190996 (-)
trnav-aac-153 NA coding downstream 584115 57923222 ~ 57923294 (-)
trnaw-cca-3 NA coding downstream 585635 57921703 ~ 57921774 (-)
LOC110530229 LOC106568854 coding downstream 597269 57876797 ~ 57910140 (-)
LOC110530949 LOC106568846 coding upstream 599849 59111123 ~ 59146231 (-)
LOC110530239 LOC106568843 coding upstream 703120 59214394 ~ 59248869 (-)
LOC110530238 LOC106568844 coding upstream 738428 59249702 ~ 59279537 (-)
LOC110530240 LOC106568842 coding upstream 775381 59286655 ~ 59338189 (-)
LOC110530242 LOC106568841 coding upstream 905134 59416408 ~ 59668443 (-)
G727514 NA non-coding downstream 74338 58432270 ~ 58433071 (-)
G727364 NA non-coding downstream 238710 58264938 ~ 58268699 (-)
G727026 NA non-coding downstream 367095 58135332 ~ 58140314 (-)
G726967 NA non-coding downstream 453263 57988734 ~ 58054146 (-)
G727571 NA non-coding upstream 603 58511877 ~ 58513910 (-)
G727649 NA non-coding upstream 128622 58639896 ~ 58640233 (-)
G727888 NA non-coding upstream 333786 58845060 ~ 58845340 (-)
G728058 LOC107575789 non-coding upstream 469626 58980900 ~ 58981280 (-)
G728222 NA non-coding upstream 593478 59104752 ~ 59105830 (-)
LOC110530228 LOC106569007 other downstream 643532 57858233 ~ 57864165 (-)
G726900 NA other downstream 660720 57820047 ~ 57846689 (-)
G726885 NA other downstream 695987 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 1201883 57224058 ~ 57305576 (-)
G726496 NA other downstream 1370296 57136141 ~ 57137113 (-)
G731764 NA other upstream 3533761 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 3669413 62165849 ~ 62185180 (-)
G735880 NA other upstream 6479027 64990301 ~ 65040241 (-)
G736216 NA other upstream 7006893 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 7589822 66101096 ~ 66101627 (-)

Expression


Co-expression Network