G728974


Basic Information

Item Value
gene id G728974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59689078 ~ 59734381 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU828015
TGACTGAATCAAAAGGATTTACATCTGAATGGAGTGGACATCAGCTTACTTTGTGATCTGTAAGGTAAGTAACTTTAATGTGTCAAGCAGAATACACGTTTTCTTTTCCATTTCCCGAAACGTAGCAACGTTTAAGACATGGATTTCATGTTGTAATGTTGACGAGGTACCCCAAAAAGTAGTTTGAATGTACGTTTCCATGTTACAAGCTAAACCAAGCTTGTTTAAACAGAAATTGTCGCAGAAATCAGCCTTGTTTGCATAGCGACGAAGAAAAGAACACAATGTAGGCTGTGATCTCAAATTCTAATCGATATAGCAATGAACGCTAATACTTGTtcgaatcccattgtgacacAGGGAGACAGTATTTGGCATGACAGGGCCCCATTGAATGTATTAGTCTCTCACTCATatagcaaaatgtgtacaattacTGGAATTTGGCTTTAAAACCGCAAAAATTTCTCTACACCTTATGGCAAAATGATAACACAATATGGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU828015 True 506 lncRNA 0.38 2 59689078 59734381

Neighbor

gene id symbol gene type direction distance location
LOC110530245 LOC106568836 coding downstream 2298 59682935 ~ 59686780 (-)
LOC110513039 LOC106568836 coding downstream 9460 59675762 ~ 59679618 (-)
LOC110530242 LOC106568841 coding downstream 20635 59416408 ~ 59668443 (-)
LOC110530240 LOC106568842 coding downstream 350889 59286655 ~ 59338189 (-)
LOC110530238 LOC106568844 coding downstream 409541 59249702 ~ 59279537 (-)
LOC110530252 LOC106568833 coding upstream 100431 59834812 ~ 59837439 (-)
LOC110530255 LOC106568830 coding upstream 436356 60170737 ~ 60211903 (-)
LOC110530257 LOC106568828 coding upstream 540907 60275288 ~ 60298094 (-)
gtpbp4 gtpbp4 coding upstream 566776 60301157 ~ 60311600 (-)
LOC118965687 NA coding upstream 572850 60307231 ~ 60307412 (-)
G728960 NA non-coding downstream 25704 59663172 ~ 59663374 (-)
G728955 NA non-coding downstream 33740 59655113 ~ 59655338 (-)
G728954 NA non-coding downstream 34169 59654683 ~ 59654909 (-)
G728953 NA non-coding downstream 34728 59654106 ~ 59654350 (-)
G728929 NA non-coding downstream 91176 59597694 ~ 59597902 (-)
G729000 NA non-coding upstream 33298 59767679 ~ 59768045 (-)
G729004 NA non-coding upstream 39463 59773844 ~ 59774151 (-)
G729030 NA non-coding upstream 79337 59813718 ~ 59815563 (-)
G729042 NA non-coding upstream 107224 59841605 ~ 59841979 (-)
G729046 NA non-coding upstream 110429 59844810 ~ 59845442 (-)
LOC110530228 LOC106569007 other downstream 1825201 57858233 ~ 57864165 (-)
G726900 NA other downstream 1842389 57820047 ~ 57846689 (-)
G726885 NA other downstream 1877656 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 2383552 57224058 ~ 57305576 (-)
G726496 NA other downstream 2551965 57136141 ~ 57137113 (-)
G731764 NA other upstream 2310654 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 2446306 62165849 ~ 62185180 (-)
G735880 NA other upstream 5255920 64990301 ~ 65040241 (-)
G736216 NA other upstream 5783786 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 6366715 66101096 ~ 66101627 (-)

Expression


Co-expression Network