G728977


Basic Information

Item Value
gene id G728977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59716489 ~ 59724668 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU828021
GCCTTGTTTGCATAGCGACGAAGAAAAGAACACAATGTAGGCTGTGATCTCAAATTCTAATCGATATAGCAATGAACGCTAATACTTGTtcgaatcccattgtgacacAGGGAGACAGTATTTGGCATGACAGGGCCCCATTGAATGTATTAGTCTCTCACTCATatagcaaaatgtgtacaattacTGGAATTTGGCTTTAAAACCGCAAAAATTTCTCTACACCTTATGGCAAAATGATAACACAATATGGCAGTCCCCGCACCACAATGTTCATTCCGTTGGGCATGCACAAATAGGTTGTTGATTGCGCTCACAGAAAAGTGTAACTTTCCCTTAATCAGATTCTAGTTTCCAAATAATTCATTTAGTGCAACGATTTCATTAATGTATCAGTTTTGATCAGAGTATTCCACAAGACGAGCCAAGCTGATTCAAATTGTTCAGCACCGCATGATGTTTCACAGTTCAGCACCAGGATGTGGATAGTACACATGACATCATTGCCATTACCTCACGCTTGGTTTTGCAGGGGTCCTCCAATGTGCAAAGAAAACAACCCAAATGAATTTCCCAAAAGGAATCTGGTACATATGTTTGTGTGAAGTAACTATTTGTTCATTCATTCTCAAAGGGTATATGGTAACAAGGCTTGTTGATGCTCACATACACATGCTCTGCTAAGACCCGCTCAAGCCAGTGTCAAAAAGCCTCAACTTTTTTCCAAAAGCAAATTCCATCATCTCATACATGCCAATCAGCCAACAGGCTTACATAGGCTTTTAGCAATTATTGTTGGGGTTCTTATAATGGGGTAGACtctggcaaagagagagagaggcactatCGATGCTACTGGTCGATGTTTGAAAAGAATACAGGAGCAGGGTAGGAATGAGCTTAACAAAAATGGCTATTCCTGCAGGTGAtatccagtcaaaagtttggacacacctactcattccagggtttttctttattctctactattttctacattgtagaataatgacgacatcaaaactatgacataacacatatggaatcatgtagtaaccagaaaagtgttaaacaaatcaaaatctatgttatatttgagattcttcaaagtagccaccctttgccttgatgacagctttgcacactcttggcattctcttatccagattcatgaggttgtgttgtggcaaggtaggggaggtataaagtagatagccctgtttggtaaaagaccaagtccatttatttgacaagaacagctcaaataagcaaagagaaatgacagtccatcattgctttaagacatgaaggtcagtcaatgcggaacatttcaagaactttgaaagtttcttcaattgcagtcgcaaaaacca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU828021 True 1373 lncRNA 0.39 2 59716489 59724668

Neighbor

gene id symbol gene type direction distance location
LOC118965536 LOC106568836 coding downstream 1181 59711502 ~ 59715308 (-)
LOC110530246 LOC106568836 coding downstream 8297 59704345 ~ 59708192 (-)
LOC118965535 LOC106568836 coding downstream 15406 59697237 ~ 59701083 (-)
LOC110518577 LOC106568836 coding downstream 22524 59690116 ~ 59693965 (-)
LOC110530245 LOC106568836 coding downstream 29709 59682935 ~ 59686780 (-)
LOC110530244 LOC106568836 coding upstream 757 59725425 ~ 59727118 (-)
LOC110530252 LOC106568833 coding upstream 110144 59834812 ~ 59837439 (-)
LOC110530255 LOC106568830 coding upstream 446069 60170737 ~ 60211903 (-)
LOC110530257 LOC106568828 coding upstream 550620 60275288 ~ 60298094 (-)
gtpbp4 gtpbp4 coding upstream 576489 60301157 ~ 60311600 (-)
G728969 NA non-coding downstream 5498 59703290 ~ 59710991 (-)
G728973 NA non-coding downstream 20352 59687624 ~ 59696137 (-)
G728967 NA non-coding downstream 25675 59682341 ~ 59690814 (-)
G728960 NA non-coding downstream 53115 59663172 ~ 59663374 (-)
G728955 NA non-coding downstream 61151 59655113 ~ 59655338 (-)
G729000 NA non-coding upstream 43011 59767679 ~ 59768045 (-)
G729004 NA non-coding upstream 49176 59773844 ~ 59774151 (-)
G729030 NA non-coding upstream 89050 59813718 ~ 59815563 (-)
G729042 NA non-coding upstream 116937 59841605 ~ 59841979 (-)
LOC110530228 LOC106569007 other downstream 1852612 57858233 ~ 57864165 (-)
G726900 NA other downstream 1869800 57820047 ~ 57846689 (-)
G726885 NA other downstream 1905067 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 2410963 57224058 ~ 57305576 (-)
G726496 NA other downstream 2579376 57136141 ~ 57137113 (-)
G731764 NA other upstream 2320367 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 2456019 62165849 ~ 62185180 (-)
G735880 NA other upstream 5265633 64990301 ~ 65040241 (-)
G736216 NA other upstream 5793499 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 6376428 66101096 ~ 66101627 (-)

Expression


Co-expression Network