G729030


Basic Information

Item Value
gene id G729030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59813718 ~ 59815563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU828082
TGGTGAATTTAAGGTTGGGCTGACTGACAGTGTTGTCATCTAGGAAGATGGTGGAACAGGAGCTGTGTTTTCGTCTCCTTGATCCATGCTACGATAATGAAATAGAATTACAAATACACATATGGCTACAAATATAAAAGCTGACTGTTAGAGGGCATATTGATACATGAAGTAAGGTTTCTACAGTAGGCTACTTCGTCAAACGGAGCACGCGATGGACATGCATGACAAATGAAGACATGAAATGCAATAATGTATTGGCTAGCTAAGGACTGTTAATCTTTTACAATAATGCAGAGATTCCTTCACTCCTAACACGTTACCATGAATGATGCAAGCCGGCACTAACTATATTAATTTAACAGGATGTCACATGAGTTGCAACTGAATGGGTCCATGATGTTGTACATTACCTTTGACTCGTCAATGTGTGTTAACTTGTAAAACAACACAAGGAATTATCATGGGAAATTCATCGAATTATGAATCAGCTACAAAGGACTAACTTTCCAACATCATGAAATAATATAGACGCCTATATTTAATAAGCATTTAATACTCACATGATTGATGAAGAGGCTCTTTCTTTTTTCACGCACTtaacagagataaaaagagaaagagcgagaaaggCTTTGATCCTTGGTTATCAGCATTGCCCTAGAAATTACGCAAGGCAATAGAAAAAAAAAAAGCATCATGGTAGATTTGCCAGCATGATCAGCAAGACATGCTGCACTGAAACAGCAAGGCTTCTATGGATCCTACCTGGAATATTTGCGACAAACTGGTAGAGAGAGAAGCATTTCAAAGTGTGCACAAAGAGGACAACGCGGTTATTATCACATTATCAGAGCTGGTCAAATCATAAAGGCAAGTTCTAACTTCCACATACGCATTCATGTCAAGTTACATTTTGACCTAACTATTAAAGTAAAGCATTCACTTAAGTGGAAGCTAGGATTCACCCCTAATGCTGGTTAGACACTGAGAACATGATAGACAGACTCCACTCTGCAGCTAGGGGGAAGCAGAAGCTCTCCGTGACAGATAGTAGCCTAAGCTTATACTCACCATTCTTGCTAGGCAACTCCACTGAAAGAGAACCAAAATCAAAACACACAACTATCATTGGCGCTCACTTTAACACATGGGTATGTATCAAATGTCACCTTTTCTTTGATGCAGCTTCTGGACAATGGTGTATCTTAACCTGCTCTGCTGCCAGTACTGTCTTGTTACAGTATAACACAACTAAGCATGACTCAAAAGTTCTTCAGATCAGTCATAAGCAGGGGTTGTTCCTAGAAAAATGCTCATATTtatcagagaaaaaaaacacagtaATAGTGTGATAGTATGAGAATGATCTGGGATTGTAATAGCATATTTTGTAATGTATTGTGTTAGAGGTTATGCTGTACTGCAGTTtgtatcaagcgtctcagagtaggtgtgctgatctaggatcaggtcccccgtCCATGTAATTTGATTCATTATGATcaaaaaagcaaaaacagatcCCTACAccgagatgctttatgaatacgggGCCAGGAGTTTTCACTAATACACCTGGGTTTATTTCTTGATCAGGTCACATGATCAGAAAAACCATTGGTCCATGTTAAACGCACCTGTTGAGTGATTCCAAAGAGTGTGAGATTCATTGATTTATTGAGACCAACTCACCATCCGGCTGAGATTTACTGAGGAATATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU828082 True 1725 lncRNA 0.39 3 59813718 59815563

Neighbor

gene id symbol gene type direction distance location
LOC110530244 LOC106568836 coding downstream 86600 59725425 ~ 59727118 (-)
LOC118965537 LOC106568836 coding downstream 93408 59718618 ~ 59720310 (-)
LOC118965536 LOC106568836 coding downstream 98410 59711502 ~ 59715308 (-)
LOC110530246 LOC106568836 coding downstream 105526 59704345 ~ 59708192 (-)
LOC118965535 LOC106568836 coding downstream 112635 59697237 ~ 59701083 (-)
LOC110530252 LOC106568833 coding upstream 19249 59834812 ~ 59837439 (-)
LOC110530255 LOC106568830 coding upstream 355174 60170737 ~ 60211903 (-)
LOC110530257 LOC106568828 coding upstream 459725 60275288 ~ 60298094 (-)
gtpbp4 gtpbp4 coding upstream 485594 60301157 ~ 60311600 (-)
LOC118965687 NA coding upstream 491668 60307231 ~ 60307412 (-)
G729004 NA non-coding downstream 39567 59773844 ~ 59774151 (-)
G729000 NA non-coding downstream 45673 59767679 ~ 59768045 (-)
G728974 NA non-coding downstream 79337 59689078 ~ 59734381 (-)
G729042 NA non-coding upstream 26042 59841605 ~ 59841979 (-)
G729046 NA non-coding upstream 29247 59844810 ~ 59845442 (-)
G729071 NA non-coding upstream 61675 59877238 ~ 59877537 (-)
G729075 NA non-coding upstream 69195 59884758 ~ 59884957 (-)
G729078 NA non-coding upstream 73263 59888826 ~ 59889104 (-)
LOC110530228 LOC106569007 other downstream 1949841 57858233 ~ 57864165 (-)
G726900 NA other downstream 1967029 57820047 ~ 57846689 (-)
G726885 NA other downstream 2002296 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 2508192 57224058 ~ 57305576 (-)
G726496 NA other downstream 2676605 57136141 ~ 57137113 (-)
G731764 NA other upstream 2229472 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 2365124 62165849 ~ 62185180 (-)
G735880 NA other upstream 5174738 64990301 ~ 65040241 (-)
G736216 NA other upstream 5702604 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 6285533 66101096 ~ 66101627 (-)

Expression


Co-expression Network