G731152 (LOC106568821)


Basic Information

Item Value
gene id G731152
gene name LOC106568821
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 60929458 ~ 60934167 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU830420
CAAGTTTATAATCACACTTAAGCCATTGATGCTGCATGTACAAGTTCATCTAGAAGAACTGCTTAATTTACAAAATATCATAGAGTACACACACCAATTCATAGAACTGCTTTACTTGAGGCAGGCATTAGCGTAACTACATTTAGTTTACTCACAATCGTTGTCCACAACTTACACTTATTTGCCCAGGTCTCAACAATCTGAGGAAACACATATTGCTTGGTATCATTATCACTATGGTAACTAGAATTGTTATCAGTATTCCCTTGACCTAACTGAGCAGTTTTCTTTCTGATCTACATTACATGGTATGGTTCAGTACACGGGACCAAAGTGAAAAAAGACATCAAACTTAAATATGTCCTATGATTCAGATGTGATGACCAATATAATAatttacacacatatacatagaAATCGAAAAACAAGATTTCTGTGATTAATATATTCCAATCATTTAACAGATAAAACTTTTTTTCAATCAGTCAAATTCTTGATGCACTAAATTGTCTGTTTGGAAACAAGCTCCACAGACAAAACAATAAAGGCGCCATATTGCACAGCTAAGATCAGGTCACACTTTCTCGCACGGCATCCACAAAGacggagaggtggaggagaggtagagaggaggagttgTGGAATGGGAgacaagagggaaggagagagatccCCGGTGAGAGCTGCTGCTGAGGCTCGGTAGTGGGTACTCCTCTCACTGTGGAAGAGCTTTGAGTATGGCGTTCACCTCCTCTGCGACAGCTGTCAATGCAAACTCAAACTGCTcCTTTGTCTGGACCATAGCCGGCCGCTGGTCCCTCAAGTGCTCCAAGGTGGCAGCAATATCAATCTCCTTAGCACCTTTAGCCATCTTATTGAGAACCATGTCAATCAGAATGTATGTTCCACTCCTCCCGGCGCCGTCGCTgcaatagagagcgagagagagagagaaagagagcgagagagagagaaagagagagagagagacagaaagagagagagagaaagagagagagaaagagagagagagaaagagagagagcgagagagaaagagagagagcgagagcgagaaagagagagagagaaagagagagagagaaagagagagagcgagagagaaagagaaagaga

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase N2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU830420 True 1136 lncRNA 0.43 3 60929458 60934167

Neighbor

gene id symbol gene type direction distance location
LOC110530262 LOC106568824 coding downstream 301982 60600202 ~ 60627476 (-)
gtpbp4 gtpbp4 coding downstream 617858 60301157 ~ 60311600 (-)
LOC118965687 NA coding downstream 622046 60307231 ~ 60307412 (-)
LOC110530257 LOC106568828 coding downstream 631364 60275288 ~ 60298094 (-)
LOC110530255 LOC106568830 coding downstream 717555 60170737 ~ 60211903 (-)
LOC110530271 LOC106569036 coding upstream 183932 61118099 ~ 61140626 (-)
si:dkey-97a13.12 LOC106569040 coding upstream 250818 61184985 ~ 61189649 (-)
adhfe1 adhfe1 coding upstream 255665 61189832 ~ 61200997 (-)
LOC110530276 LOC106569041 coding upstream 287604 61221771 ~ 61233430 (-)
LOC110529124 dnajc5b coding upstream 299706 61233873 ~ 61239771 (-)
G731141 NA non-coding downstream 23130 60905830 ~ 60906328 (-)
G731088 NA non-coding downstream 74748 60825044 ~ 60854710 (-)
G730050 NA non-coding downstream 221619 60707626 ~ 60707839 (-)
G730002 NA non-coding downstream 279693 60649530 ~ 60649765 (-)
G729998 NA non-coding downstream 283995 60645248 ~ 60645463 (-)
G731226 NA non-coding upstream 106335 61040502 ~ 61042179 (-)
G731168 NA non-coding upstream 113392 61047559 ~ 61048552 (-)
G731166 NA non-coding upstream 114700 61048867 ~ 61051761 (-)
G731229 NA non-coding upstream 118096 61052263 ~ 61052542 (-)
G731230 NA non-coding upstream 118435 61052602 ~ 61052874 (-)
LOC110530228 LOC106569007 other downstream 3065581 57858233 ~ 57864165 (-)
G726900 NA other downstream 3082769 57820047 ~ 57846689 (-)
G726885 NA other downstream 3118036 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 3623932 57224058 ~ 57305576 (-)
G726496 NA other downstream 3792345 57136141 ~ 57137113 (-)
G731764 NA other upstream 1110868 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 1246520 62165849 ~ 62185180 (-)
G735880 NA other upstream 4056134 64990301 ~ 65040241 (-)
G736216 NA other upstream 4584000 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 5166929 66101096 ~ 66101627 (-)

Expression


Co-expression Network