G731166


Basic Information

Item Value
gene id G731166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61048867 ~ 61051761 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU830434
CCATAAATCATAAATTAGCAAGCAGCATTGGCAAAAGCAATATTAGTCAACAGCTTGCATAAGGTGTAAATTAATTTTGCATAAAATGCCCACAGTGGATGAACATCGATGCAGGTGAACATAGTGCTATTTAAtatcaacatcacacctgcaAAAATACATTTCTGAACCGTAACAATGAGCTTTCTACACGAAAACTCTTGTTTTACAATATTGCTTTGATTTACCATTttgttgtttacatactcaccttaAAAGACAGTCAATATGAAACAACTGTACAAATAATACAACCCACAACTGATCACAAATAAAATGTGggggaaaagaaaaaaaaatctactgTGAAAACCAACCAAATAAGCCAGGGGTGTAGTAGTCTAACCATAGCACAAGTACAATggttgcatctgaaatggcatcctatatagggtgccatttcagacatgGCCATTGAGTGACGATGCACACTTCAGTATTGTCATCTCACTATACATATATGATACAACTGTCAActtcacagtaatacacaatacagAAAAACAGGTCTAAGGCATTATGCTAGGTCTTTAGCATGTTAAGGTACTTGCATGTAATATTTACCAATTGATCAAATAGCAAACTATAAATTAAGAACATTTTTTCAAAAAAAAGTATCGATCAGTCAGAATCAGAGAAGAAAAAGTAATTCAATTCAACCAACCCTTGTGAGTGAATTTAATATTTGTATGCACACTTTTTCCTTAAAACTTGTCGTCGTGATTGCCAAGATGCATACCTTACAAAAGGCTGTTAACACAGTAACACTTCATGGCTTACGTTTATTTTAAAGGTTGTATAATAAAATCTTTGGATTTGCAACGAGAGCAGTACATCCATTCTATGACAATtgtttttctttcctttttttgTGACTTAATTTGCATCAAGAGCATCCTAATCTTCAAAATTTGCTCAACTCTTAAAAAATGCCTGGTTTAGGAAAATGTTGAATGAATTGGGAGAAATTGGCCatcacaaaaataagaaatatCCTTTGCAGCGTCAAAGAGATATCATAATAACCAGTGCAAACCTACAAAAAAGATATTTTCTGGACACACATTTTCACAAACACTTGATTATGTGAGGCCAACTTCATTTCAGCATTTgcagactatttggaattttcacattcttctaaaaaaaaaagcaaaattATATATAAAATAATTGCTAAATTATAAATTCTGTGAGATTTGCTATGTGCTTACAGACTATAACTAAACTGGAGTAGTACAGGAATATGGTGTGAAAAATGCATATTGCCTGTCCATTTTACACGACTGAAGCAGAACTTGTTTTGTACCTTCCAGGTGATCTATAGACATTACCCCCAATCAACAGACAAAGACCACCCTAAAGAATTCAGTTATGCCTGTTGGCAGGCCTGTCCATTCCTTTCATTGTGAGGTTGAGGTGAAGTGCAAGGAAAAATCCTTACGCAATAAGTTGAAACCCTGAAAAAAGTGAGTTCATCAACTCAAACGATATGACTGTAGTCACATTTCAGTGGTTGTTTTTTGTAACACCaggctggagagaaaacagacATCTTATTTCATTAATTTATACTGCAATATATACACAACCTATGAACATTCACCTTCATACATATCGCAGCAGGGGGATTCACTTTAACATTTCATCTAAAACTACAGGACTTAAAATATGGAATTCAATTAGACACAATAAGGTAACATTTTAAGGGATACTTGTTAAGTCACTTAACCATTTCCTCCCTCTTATAGTGTCATACAAATAATGTTTCTAAAGTTTAAAAACTATAAATACctgtaaaacatttattttataaacCTTTCAAGAGACTACTTTAGTTAGGCTTACAATATAACCATTCAAAATCAAACACAATTGTATAGTTTATGCTCTTCGAGCCATTTATAATATACCACTTGTCTCACACCCGTGCATGTGTATACAGCACAAACGCACAAagaaaatgttatttaaaaaaaagacccggagAGAGAGTAGTAAAGAGTGTATTTTCTGAGGGGAGCTATAGTCTGGGTTCTGTCCCTTAATTAATACATTCATCTGACCAGATGCCTCCTGACAGGATCAGTTTTGAGTCTATATTCTGTGAGTATGGGTCcgttgtatgcatgtgtgtatacgTGTATTTGTCTGTATCCATTttctttgtgtgcatgtgtgtgtatgcaagtgTGTCAGAGTGTGAGCTGGAcgatatggacaaaaatccatattGCGACAAATTGCCTGACTTGATGCGATAATGATAAATAGAACGATAAGTTTACCACAGTTAATTTATtatcctttaaactactactactatggttGTAGCCTACAATTGTCACATTAGCATTAACCCATATTAGCAAACCTACAGCACCAGgcaaaaggtttggacacacctactcattcaagggttat
>TU830435
TGACTTGTCAAGCACATTTTccctcctgaacttatttaggtttgacaactaaaggggctgaatacttccACTCgacacatttcagcttttcatttttactCTGTAAAAACGTCTAAAAACACaactccactttgacattatggggtattattgtTCGTAGGCCTGTGACaatattttaatccattttaagttcaggctgtaacaacaaaatgtgggaaaaaagtCAAAAGGTACACAGATACATGTATTACAACAGGGTAACAGTTGTTACTAAAAAGTGTGGCTAACTGATTACATTACAGAGTAATTAGTCTGGaaactgaataataataatattctgTCAACCTTATGGGATAGagacaaaaattgtagaccaaGTCAAATCAGTAATTACACTTCAATCAACAtaataaaaataatttatttacaATGCCATAAATCATAAATTAGCAAGCAGCATTGGCAAAAGCAATATTAGTCAACAGCTTGCATAAGGTGTAAATTAATTTTGCATAAAATGCCCACAGTGGATGAACATCGATGCAGGTGAACATAGTGCTATTTAAtatcaacatcacacctgcaAAAATACATTTCTGAACCGTAACAATGAGCTTTCTACACGAAAACTCTTGTTTTACAATATTGCTTTGATTTACCATTttgttgtttacatactcaccttaAAAGACAGTCAATATGAAACAACTGTACAAATAATACAACCCACAACTGATCACAAATAAAATGTGggggaaaagaaaaaaaaatctactgTGAAAACCAACCAAATAAGCCAGGGGTGTAGTAGTCTAACCATAGCACAAGTACAATggttgcatctgaaatggcatcctatatagggtgccatttcagacatgGCCATTGAGTGACGATGCACACTTCAGTATTGTCATCTCACTATACATATATGATACAACTGTCAActtcacagtaatacacaatacagAAAAACAGGTCTAAGGCATTATGCTAGGTCTTTAGCATGTTAAGGTACTTGCATGTAATATTTACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU830434 False 2463 lncRNA 0.35 1 61048867 61051329
TU830435 True 1037 lncRNA 0.34 1 61050725 61051761

Neighbor

gene id symbol gene type direction distance location
LOC110530262 LOC106568824 coding downstream 421391 60600202 ~ 60627476 (-)
gtpbp4 gtpbp4 coding downstream 737267 60301157 ~ 60311600 (-)
LOC118965687 NA coding downstream 741455 60307231 ~ 60307412 (-)
LOC110530257 LOC106568828 coding downstream 750773 60275288 ~ 60298094 (-)
LOC110530255 LOC106568830 coding downstream 836964 60170737 ~ 60211903 (-)
LOC110530271 LOC106569036 coding upstream 66338 61118099 ~ 61140626 (-)
si:dkey-97a13.12 LOC106569040 coding upstream 133224 61184985 ~ 61189649 (-)
adhfe1 adhfe1 coding upstream 138071 61189832 ~ 61200997 (-)
LOC110530276 LOC106569041 coding upstream 170010 61221771 ~ 61233430 (-)
LOC110529124 dnajc5b coding upstream 182112 61233873 ~ 61239771 (-)
G731168 NA non-coding downstream 315 61047559 ~ 61048552 (-)
G731226 NA non-coding downstream 6688 61040502 ~ 61042179 (-)
G731152 LOC106568821 non-coding downstream 114700 60929458 ~ 60934167 (-)
G731141 NA non-coding downstream 142539 60905830 ~ 60906328 (-)
G731088 NA non-coding downstream 194157 60825044 ~ 60854710 (-)
G731229 NA non-coding upstream 502 61052263 ~ 61052542 (-)
G731230 NA non-coding upstream 841 61052602 ~ 61052874 (-)
G731232 NA non-coding upstream 2021 61053782 ~ 61053987 (-)
G731256 LOC106569033 non-coding upstream 34390 61086151 ~ 61089660 (-)
G731287 NA non-coding upstream 106170 61157931 ~ 61160872 (-)
LOC110530228 LOC106569007 other downstream 3184990 57858233 ~ 57864165 (-)
G726900 NA other downstream 3202178 57820047 ~ 57846689 (-)
G726885 NA other downstream 3237445 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 3743341 57224058 ~ 57305576 (-)
G726496 NA other downstream 3911754 57136141 ~ 57137113 (-)
G731764 NA other upstream 993274 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 1128926 62165849 ~ 62185180 (-)
G735880 NA other upstream 3938540 64990301 ~ 65040241 (-)
G736216 NA other upstream 4466406 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 5049335 66101096 ~ 66101627 (-)

Expression


Co-expression Network