G731344


Basic Information

Item Value
gene id G731344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61295363 ~ 61297184 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU830667
GTGACAAGTTGTTTTAATGAAAATGTAACTGCAACTGGCAAGTATCAAAATATCAATTTGGCAAAGCTTTTCACAAAATAGTTTGCCACGCATGTTTCTAGCCAAAAACGACTTACATCAAAATGGTAAACAGTTATATCAAACAGTCTTTCAGTTAccagaaaatacatattttttttgccATAATGAAAAGCACCGGTTTTCATTCAATGTACTGAACGTCCAACCAGAGACACGATCGTGCCTTGTGTATAGAATCAAAAAAACAATaccaaaaataaattaaatatggAATGTTTCATGTTGACTGAGTCACTGACCAATCTACTAATGCCTAGTAATTTCCTTCCACATCAGAGGCAAACAGTCAGACAATGCATTGAGAATACATGATCCACCTTATTAAAAAACAACTGGTTTGGTCACTTAGTTTTGTGCATAGCTTAAAAGGCATCCGTTGCCAGTCTTAAATGTTGCATGTTTGCATTTTAGAAAGGGCTTCAACTCTCTAAAATAACATTGTATGTCATGGCGCAGCTCTACCAGAGGCAGACCTCCCAATTTCTCTTAATAAGTAGTCATGCTGTTTATACCTTCAACACACGTAACTCTGGTCATCCGTTACTAATATGGAAGAGTGGTTATTCAAGTGTTGAAAGAATGTTAaggtcatagaaatagaatctatattctatttctatggttaagGCCACACGCATGCCCCCTTTCCCCCCCTAACAAAACATCAGACTATGGTTAAATCCCCAACAACATACAGGTAAAGAAAGAAATTGATTTCATACCACATCCAATATACTTTTTTTTCACACAATTAGTCTCTGAGCTGACTGAGTCTTGGGTCATAAGACATGTTATAGTTCACAGTGCAAGTAGCAACAAACGGACCAAAACAGTCGTTTCAGGGCATTTGGTGTGTTGATCTGCAATCAGATGTTTGTTCAGTGTGTACAGGACAACTATTTCATGTGAGTGGttattcacatacagtatgtactttttttttttttttttacagaaccaATGTTTAATTTGTAAAATACAACACAAAGTAGATGCTTGTAAAGAGGCAGCAATGAAGTGGGCTCTTCACATTATTTATTGTACGAGGAAGTATTACTAAGTCTGAAATAGAGAAACCCACAGAAGCTTGTCTCAATCACTCAACATGAACCTCTCTCTGAATACAAGGTTTCCTCACTTTAAAAACATTAAAACAAATTGTTTGCAGATGGCACTATAATCAGAAgggtattttttaaataattcccTTCAGGTCTCTATTTAAAGAGTGGCATGTCAAATTAGGGATGTCAGAGCAGAACTacggtaaaaataaataaaatatgaaaaaaagAAATGGGAAAAAAATACAGCAGAAGCAACATGAGGTATCTATGTATTGCTCTATGTTGTTAAAGTAAAGGGTCCAAATGCAATAAATTAAGTTAAATTATGTGAAAAACAAAAACAGTGGTTAACCTAGATGGGGAGCATGTGGCTGAGGTGCTGTGGTGCAGGGAGTGATGGGTAATGTAGTTTTTGTCCGGTGAGGAGATTCTCTTCGCTTCCTGACACTTCACTCTCTTGGCGAGTCATGACCGTTTACTTCCCTGAGGTAATTCTTTGGAGTTTGAGTCCTTGGCATCAGAAGTCCTCTGTTCCTCTGAGGCCCTACTAGTGTTAGCCTCCTGCTTGTCTCTACCCTCCTTCCAGCCTTGCTTGTTCAGGCTCAGGTGGCCCATCATGGTCTGGGACAGCCGTGTGTCAGAGAAGCGTGACCATTCCACAAACAGAGGCTCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU830667 True 1822 lncRNA 0.38 1 61295363 61297184

Neighbor

gene id symbol gene type direction distance location
LOC110529124 dnajc5b coding downstream 55592 61233873 ~ 61239771 (-)
LOC110530276 LOC106569041 coding downstream 61933 61221771 ~ 61233430 (-)
adhfe1 adhfe1 coding downstream 94366 61189832 ~ 61200997 (-)
si:dkey-97a13.12 LOC106569040 coding downstream 105714 61184985 ~ 61189649 (-)
LOC110530271 LOC106569036 coding downstream 154737 61118099 ~ 61140626 (-)
LOC110530281 bhlhe22 coding upstream 42818 61340002 ~ 61341211 (-)
LOC110530300 NA coding upstream 706988 62004172 ~ 62033993 (-)
LOC110530302 LOC106569065 coding upstream 752719 62049903 ~ 62064021 (-)
LOC110530303 LOC106569067 coding upstream 770813 62067997 ~ 62145625 (-)
LOC110530961 dhx9 coding upstream 868665 62165849 ~ 62185180 (-)
G731360 NA non-coding downstream 6810 61288312 ~ 61288553 (-)
G731295 NA non-coding downstream 122102 61173034 ~ 61173261 (-)
G731292 LOC106569038 non-coding downstream 124937 61170126 ~ 61170426 (-)
G731287 NA non-coding downstream 134491 61157931 ~ 61160872 (-)
G731256 LOC106569033 non-coding downstream 205703 61086151 ~ 61089660 (-)
G731365 NA non-coding upstream 9136 61306320 ~ 61306549 (-)
G731367 NA non-coding upstream 12391 61309575 ~ 61310085 (-)
G731375 NA non-coding upstream 28042 61325226 ~ 61325525 (-)
G731381 NA non-coding upstream 45610 61342794 ~ 61343177 (-)
G731382 NA non-coding upstream 46930 61344114 ~ 61358907 (-)
LOC110530228 LOC106569007 other downstream 3431486 57858233 ~ 57864165 (-)
G726900 NA other downstream 3448674 57820047 ~ 57846689 (-)
G726885 NA other downstream 3483941 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 3989837 57224058 ~ 57305576 (-)
G726496 NA other downstream 4158250 57136141 ~ 57137113 (-)
G731764 NA other upstream 747851 62045035 ~ 62048119 (-)
G735880 NA other upstream 3693117 64990301 ~ 65040241 (-)
G736216 NA other upstream 4220983 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 4803912 66101096 ~ 66101627 (-)

Expression


Co-expression Network