G733486


Basic Information

Item Value
gene id G733486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 63433138 ~ 63433605 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU832978
CATAAACCGCTCTCTCTGGCCCATGGCCATGCCTGCATAGCCCTGGTTCTGTATGTGCAATTGCAAAGTACAGAACCACTGTCACACTCACGCATCACATGACAGCTGAGCTGTGCTGCAGTCGACCATGTGTTTATTTATCGTAAACCTAGGCGTGCTTGCATTTCTTTTTCATATGGCCCAGTGGAGACAGGCACACATTTTACTAGGTTAGAGTTCACATGAACTAACAGGGTTAAATCATTTGCAGTTGAAGTTAGCACATACAAGGTGGGAAACAATTTTGAGAAATAGTATATGCAGAGAAGTTCAAGTTTAAAAACCTAAGAAGAGCTGATtttctggacacagattaagcctagtcctggactaaaaagcaagcTCAATGGAAATTCTCCctgaaaataggtttttattcCAGGATTAggattaaagacatgctccggaatTTTGGcgactacatttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU832978 True 468 lncRNA 0.41 1 63433138 63433605

Neighbor

gene id symbol gene type direction distance location
LOC110530314 LOC106569080 coding downstream 138435 63292443 ~ 63294703 (-)
LOC110530312 tnn coding downstream 193308 63209032 ~ 63239830 (-)
LOC110530309 LOC106569072 coding downstream 465653 62882950 ~ 62967485 (-)
LOC110530307 LOC106569071 coding downstream 825372 62513304 ~ 62607766 (-)
LOC110530306 LOC106569070 coding downstream 1120645 62299897 ~ 62312493 (-)
LOC110530317 LOC106569084 coding upstream 42187 63475792 ~ 63494725 (-)
kiss1ra LOC106569085 coding upstream 113974 63547579 ~ 63561814 (-)
LOC110530962 LOC106569119 coding upstream 338078 63771683 ~ 63777609 (-)
slc6a9 LOC106569088 coding upstream 369236 63802841 ~ 63885395 (-)
klf17 LOC106569090 coding upstream 456072 63889677 ~ 63892473 (-)
G733304 NA non-coding downstream 94106 63338827 ~ 63339032 (-)
G733303 NA non-coding downstream 94936 63337981 ~ 63338202 (-)
G733242 NA non-coding downstream 102543 63288684 ~ 63330595 (-)
G733245 NA non-coding downstream 146763 63285860 ~ 63286375 (-)
G733270 NA non-coding downstream 157480 63275445 ~ 63275658 (-)
G733488 NA non-coding upstream 1853 63435458 ~ 63435871 (-)
G733489 NA non-coding upstream 4030 63437635 ~ 63437914 (-)
G733492 NA non-coding upstream 5860 63439465 ~ 63439692 (-)
G733496 NA non-coding upstream 11690 63445295 ~ 63445510 (-)
G733497 NA non-coding upstream 13581 63447186 ~ 63447523 (-)
LOC110530961 dhx9 other downstream 1247958 62165849 ~ 62185180 (-)
G731764 NA other downstream 1385019 62045035 ~ 62048119 (-)
LOC110530228 LOC106569007 other downstream 5569261 57858233 ~ 57864165 (-)
G726900 NA other downstream 5586449 57820047 ~ 57846689 (-)
G726885 NA other downstream 5621716 57805388 ~ 57811422 (-)
G735880 NA other upstream 1556696 64990301 ~ 65040241 (-)
G736216 NA other upstream 2084562 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 2667491 66101096 ~ 66101627 (-)
LOC110530385 LOC106569212 other upstream 2760049 66192359 ~ 66210028 (-)
G737449 LOC106569204 other upstream 3125591 66559196 ~ 66560517 (-)

Expression


Co-expression Network