G733809


Basic Information

Item Value
gene id G733809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 63551460 ~ 63553160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU833329
GATAtgataggggcgtggatcagatagtggcgtggatcagaaaaccagtcagtatctggtgtgaccaccatttgcctcatgcagtgtgacacatctcatagagttgatcaggctgttgattgtggcctgtggaatgttgtcccactcttcaatggctgtgtgaagttgctggacatTGGGGGGGAACTGTAACACGCTggcgtacatgtcgatccagagcatccaaaacatgctcaatgggtggcatgtctggtgagtaaGGAGGCCATGgcaaactgggacattttcagcttccaggaattgtgtacagatccttgcgacatggggccatgcattatcatgctgaaacatgaggtgatggtggaggatgaatggcatgacaatgagcctcaggattttgtcatggtatctctgcattcaaattgacattgataaactgcaattgtgtttgttgtctgtagtttatgcctgcccataccataaccccaccgccatcatggggcactctgttcacaacattgacgttagcaaaccacacacacacacacacacacacacacacacacacacacac

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU833329 True 574 lncRNA 0.48 2 63551460 63553160

Neighbor

gene id symbol gene type direction distance location
LOC110530317 LOC106569084 coding downstream 56735 63475792 ~ 63494725 (-)
LOC110530314 LOC106569080 coding downstream 256757 63292443 ~ 63294703 (-)
LOC110530312 tnn coding downstream 311630 63209032 ~ 63239830 (-)
LOC110530309 LOC106569072 coding downstream 583975 62882950 ~ 62967485 (-)
LOC110530307 LOC106569071 coding downstream 943694 62513304 ~ 62607766 (-)
LOC110530962 LOC106569119 coding upstream 218523 63771683 ~ 63777609 (-)
slc6a9 LOC106569088 coding upstream 249681 63802841 ~ 63885395 (-)
klf17 LOC106569090 coding upstream 336517 63889677 ~ 63892473 (-)
LOC110530324 LOC106599374 coding upstream 432169 63985329 ~ 64157280 (-)
tmem53 LOC106569260 coding upstream 747071 64300231 ~ 64301927 (-)
G733806 NA non-coding downstream 5579 63544244 ~ 63545881 (-)
G733540 NA non-coding downstream 28667 63522510 ~ 63522793 (-)
G733537 NA non-coding downstream 31259 63519897 ~ 63520201 (-)
G733480 NA non-coding downstream 33106 63506107 ~ 63518354 (-)
G733479 NA non-coding downstream 45479 63505665 ~ 63505981 (-)
G733841 atp6v0b non-coding upstream 50104 63603264 ~ 63612708 (-)
G733895 NA non-coding upstream 140657 63693817 ~ 63696281 (-)
G733919 NA non-coding upstream 175624 63728784 ~ 63729801 (-)
G733921 NA non-coding upstream 204172 63757332 ~ 63760474 (-)
G733941 NA non-coding upstream 215704 63768864 ~ 63769070 (-)
LOC110530961 dhx9 other downstream 1366280 62165849 ~ 62185180 (-)
G731764 NA other downstream 1503341 62045035 ~ 62048119 (-)
LOC110530228 LOC106569007 other downstream 5687583 57858233 ~ 57864165 (-)
G726900 NA other downstream 5704771 57820047 ~ 57846689 (-)
G726885 NA other downstream 5740038 57805388 ~ 57811422 (-)
G735880 NA other upstream 1437141 64990301 ~ 65040241 (-)
G736216 NA other upstream 1965007 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 2547936 66101096 ~ 66101627 (-)
LOC110530385 LOC106569212 other upstream 2640494 66192359 ~ 66210028 (-)
G737449 LOC106569204 other upstream 3006036 66559196 ~ 66560517 (-)

Expression


Co-expression Network