G734933



Basic Information


Item Value
gene id G734933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 64621551 ~ 64621846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU834553
TGTGTTCACATTCGGTGAAGGGttggggaggtactcagatccagactcattgcggagaagaaactaacgtccGTGGGTGTGGCGTAGCGTTTGGCCAGAGCAAGGAGTCTGTGTAGCCAGGCAAGGTGACAGCACCATCATTCTGGCCTAGTCACCCATAAGTGGTGTGGCTGTGGcagtcagagagcgagagagagagagagagagagagagatggccacAGGTACAGCATCACGGCACAACACTGGCCAGTGGTGGAAGGAGATGTGTGACGCTCATCTTCACGTCAGTGGGGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU834553 True 296 lncRNA 0.55 1 64621551 64621846

Neighbor


gene id symbol gene type direction distance location
LOC110530335 LOC106569249 coding downstream 1503 64557297 ~ 64620048 (-)
LOC110530333 NA coding downstream 76966 64539032 ~ 64544585 (-)
LOC118965543 NA coding downstream 82583 64532271 ~ 64538968 (-)
LOC110530332 LOC106569254 coding downstream 92883 64511556 ~ 64528668 (-)
LOC110530331 LOC106569255 coding downstream 110325 64505917 ~ 64511226 (-)
LOC110530336 LOC106569248 coding upstream 9099 64630945 ~ 64640936 (-)
LOC110530340 LOC106569246 coding upstream 35999 64657845 ~ 64665706 (-)
LOC110530341 LOC106569246 coding upstream 47624 64669470 ~ 64685654 (-)
c8h5orf22 cssa14h5orf22 coding upstream 89621 64711467 ~ 64719874 (-)
cdh6 LOC106569244 coding upstream 136554 64758400 ~ 64794173 (-)
G734932 NA non-coding downstream 2641 64618686 ~ 64618910 (-)
G734930 NA non-coding downstream 5991 64615360 ~ 64615560 (-)
G734920 NA non-coding downstream 15608 64605546 ~ 64605943 (-)
G734917 NA non-coding downstream 19591 64601600 ~ 64601960 (-)
G734893 NA non-coding downstream 50440 64570831 ~ 64571111 (-)
G734936 NA non-coding upstream 3031 64624877 ~ 64625300 (-)
G735049 NA non-coding upstream 200458 64822304 ~ 64822678 (-)
G735081 NA non-coding upstream 220644 64842490 ~ 64842697 (-)
G735166 NA non-coding upstream 268958 64890804 ~ 64891051 (-)
G735192 NA non-coding upstream 286272 64908118 ~ 64908398 (-)
LOC110530961 dhx9 other downstream 2436371 62165849 ~ 62185180 (-)
G731764 NA other downstream 2573432 62045035 ~ 62048119 (-)
LOC110530228 LOC106569007 other downstream 6757674 57858233 ~ 57864165 (-)
G726900 NA other downstream 6774862 57820047 ~ 57846689 (-)
G726885 NA other downstream 6810129 57805388 ~ 57811422 (-)
G735880 NA other upstream 368455 64990301 ~ 65040241 (-)
G736216 NA other upstream 896321 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 1479250 66101096 ~ 66101627 (-)
LOC110530385 LOC106569212 other upstream 1571808 66192359 ~ 66210028 (-)
G737449 LOC106569204 other upstream 1937350 66559196 ~ 66560517 (-)

Expression



Co-expression Network