G736134


Basic Information

Item Value
gene id G736134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65383228 ~ 65386534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU835881
ACAGAAAGCCCTTTATTAGTTTCTCAACCTCACAAGCATTCAATTCTACAATACCTTTTTACAACATGGTTTACAGCTTTACAAAATCAGAGAACACTAAATATTTACAGAGTTGTGCAAACAATAGTTCTCTAACATGACAGATACATCTCTAAAATCTCTAAAAGGGCATGCATAGGAGTGAAGTTTGGCAAGTTAAAatacttttctgaagacaaaacCCTCTTAAATACATACACttgcatgtaaacttctgtcaCTAATTATGAATGTAAACACCAGTTACTAATATGAATATAAGTCAGTTGCCATCCCAAAGGTAAACATTACAATGTCCACATAGTGCATGTCTTAGATACATGATCTGTAAAACCAAACACTTTAGTACAAGCATGTTAGTACATCTACTGCCTTAAAAGGCCTCTAAACATTATTTTGCATGTACAGTAGCTATCTTGTTAGCTCAAAGATTTGGCAGTGCATCGGAAGCTTGAGAAATCACCAAGCATTTTGTTCTTCAAAGTTCCACTCGCACAACTCCACACATCTAAGCTCATTGCATAAGAGAGATGACATCTGAATGACTGATGCTAGATGAAAGTCTGCATCTATGCCTTCATCCACCATagaaatgtaaataaatgatttgaTTTCTTTACATAAATTGTTATTTTAGATCAAATCTTTATATTATTAAGTGTCACTCTAATTCGTATAAAATATAACACCATCCGTTAAAATCACAGATTTCTCACATCAATAAAAATGTAACTAGATTTCCAGCACCACTAAACTACATTAGTATTAACTCTAGAATGTTTGCACCTTTTTGTGTTGATCATTTGTAAAGCTAGTAGTTCTTGTGAATATGGTTATCATCATACAACAGGGCCattccaccaattcggtgccttttgagaagtgtaacttggaaaaaaaaaaaacttttgattTCACTTAATTTGTACATTCGGTCATAAAATGCACATTTAACTTCATAAAAACATGttcacgtaaaaaaaaaaaaagaccctataagtgccaaataaagtaacatttaatcttaaatcagccattaATCCCCTTGTGAACAGGGGGAATGTACgtttgttgtgtgcaacagggagtggcaattaAATGCAAGCTTCACCAAAACAATGGAATAGCttaaacatttctagcctgtcttaTCTATGTGTTATGCTCGACCCCattcagttttccaccacaaaacaccagaaaatggccaaaaaggGTAGAAACGGATCACCTGCTTTTACACCATGATTTGACTATGTTTtttaaaggaatagtttcacaaTATTAAAAACAGATTTCAGTTAATGTAACAGGATTGACCTTAAAATGTTAATGTTTTGTCTTTTAGAAGAACCTctcatccagagtgacttacaggagcaattagggttaagtggctCCTCGAGGGCACAGGCAGAATTtacacctagtcagctcggggattcgaaacAGCGACCTTTCGATTATTGGCCCATCGCTCTTAACTGCTAAACTgaatcactaatcacatgaaataaaaaatactttcCAGAAACGACTGTCAAAGCAacaactagggctttacaatgacgGTGAAATTATGGAGGAATCTTTGGATTAAGTGGGttgaaatcttcctagaagtgacaGGGTTGATGGAGgaacatgtcaaaatgctgaattggCACTTTAGCAAACCTTTATTCATATTCTTAAAAAACATTGAATTCTCCATGgagtctatattaaagggcacttcatttaatataacaggcctTTACAATTCAATACTGGTGCACTTTCCTCAACTATACTTTATTCTGTTATGTAACAGGGGTCTGTGTGCTGCTAAAAGCTTAGCTTCCTCCACTGACCGACTGCCCCATACTGGGTTCGAACCAGTGATCCGCTGCTTCGCAACACACGTAACTGTCCTCCTTGACAATGTTCCAACGTGTTGAGCCACCCAAAACGTACAAATTGGATGGCTCCATCTGCAACATTTCAAGCAAGCTGTGGCATGAGTTTACGGTATGTTTTTAACTTTGTTACATATAGATATAAAAAGATAATCATATGTCCTTGGACAAAGAAGCTGCTGGTGTATGTGTGGTTTTGCTGCTGTATCCACCTTGCATCTTGTGTCCGGTGAAGCTGGGTATATGAGCAATGCGGTGGATACTCCTCGCACCTTGACTCATGGCAGtcggggagaggagggaaggagagggaggggaggaggaggtggaggacgtGGATGTGGGGGACAAAGAGGAGGAGTtggaagagggggaggtggaggaggaagaggaagatgagcAGTGAGAGAAAGGGCTGGGTCGGCCATTTTGGGTTTGTGATGAGAGGGAAAGATTTTGACGTCTGTCATTGAGAGAAGGGCTAGGAGGGACGAGACGACTCAGATTAAGAGATGGGATGAAAGATTTGtgtgaggaggatggggaggaggaaggTGATTTAATAGGGTTAGACACAGTGTTTGGACCGGGCAATGACATATTTTTTCCAGAGCTATGACAAAAGGCTGGGATCTTAGAAGCAGGTAAAGCAAGGAAATAATGGTTACTATCCCCACCAGCTTTCTCAGCACTTCTGTTAGCCTGCGAAACAAAGATGGCGGGAGATATGGAATGTCAAGAAAGGCAAAAGAAGGGTTATTATACAAAGATAAATAAGCATCATGTTAGAAAGCAAAGAGGTGGCACTAAAATACACTAATTATAGATCATTCATAGAAAATATGAAGTCAGGAAATTATCTACAGGGTTAATGATGCCCACTAATTCACTAATTCAATGCACCAACTCATAACACACATGCAGTGTTTATGACATACATATCATGCTTCTCAGGGTGAGATAAAGAAGGTTAAATAATATTTGGACAGTTGACAGAGGGTGAGTTTATTTTGAAAATAGGTTCAGTTTAGTTGATTTAGTTTAAGGTTGAAGACGTTGAAAAAGTGAAGTGAATATATCCTTGCCAATCTTCTATCCTTGCCTCCACCTCCAAGTGAATTACAATTACATGGTGAGCATGCTCAAGGAGCATATAGAGGGGAAGAAGAGGGTACAGATGGTAACAGTCAAAAGGTCTTGAAGACATACAGTAGGAGAACAAGACAGAGAGTGAGTGGATTCAACAAACATTTCCTATAATTGTACAGTTTCCAAGGCTTCGTGTAAACTTCTCTAAATCATGAAAGTAGTTTCTCCAATACTTCATAACACAGGCCA

Function

NR:

description
sickle tail protein-like isoform X4

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU835881 True 3275 lncRNA 0.38 2 65383228 65386534

Neighbor

gene id symbol gene type direction distance location
c8h10orf67 cssa14h10orf67 coding downstream 92418 65269996 ~ 65290810 (-)
cahz LOC100135827 coding downstream 247555 65129974 ~ 65135673 (-)
cdh6 LOC106569244 coding downstream 589055 64758400 ~ 64794173 (-)
c8h5orf22 cssa14h5orf22 coding downstream 663354 64711467 ~ 64719874 (-)
LOC110530341 LOC106569246 coding downstream 697574 64669470 ~ 64685654 (-)
paxip1 LOC106569237 coding upstream 3014 65389548 ~ 65408613 (-)
cnpy1 LOC106569234 coding upstream 39433 65425967 ~ 65447350 (-)
shhb LOC106569233 coding upstream 97126 65483660 ~ 65486476 (-)
LOC110530358 LOC106569231 coding upstream 133716 65520250 ~ 65546632 (-)
LOC110530362 LOC106569229 coding upstream 222244 65608778 ~ 65637987 (-)
G736049 LOC106569241 non-coding downstream 132039 65250850 ~ 65251189 (-)
G735971 NA non-coding downstream 257066 65122982 ~ 65126162 (-)
G735863 NA non-coding downstream 416103 64966805 ~ 64967125 (-)
G735853 NA non-coding downstream 427811 64955134 ~ 64955417 (-)
G735849 NA non-coding downstream 432254 64950747 ~ 64950974 (-)
G736188 NA non-coding upstream 85959 65472493 ~ 65472965 (-)
G736190 NA non-coding upstream 88455 65474989 ~ 65475294 (-)
G736296 NA non-coding upstream 256821 65643355 ~ 65644138 (-)
G735880 NA other downstream 342987 64990301 ~ 65040241 (-)
LOC110530961 dhx9 other downstream 3198048 62165849 ~ 62185180 (-)
G731764 NA other downstream 3335109 62045035 ~ 62048119 (-)
LOC110530228 LOC106569007 other downstream 7519351 57858233 ~ 57864165 (-)
G726900 NA other downstream 7536539 57820047 ~ 57846689 (-)
G736216 NA other upstream 131633 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 714562 66101096 ~ 66101627 (-)
LOC110530385 LOC106569212 other upstream 807120 66192359 ~ 66210028 (-)
G737449 LOC106569204 other upstream 1172662 66559196 ~ 66560517 (-)
G737422 LOC106569284 other upstream 1327159 66713693 ~ 66714496 (-)

Expression


Co-expression Network