G736888


Basic Information

Item Value
gene id G736888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66198228 ~ 66199927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU836774
tgagtttgatgctgactcacctggggtgaccgagaagtgTTCTGCCTGCCCTCTCAACTCCCAGACGggctcctccagcaccggtcgggccgtgtgtcctctccgaccacagctggtgcaggaggagcctcctcctccggtacccctcgaaGCGGCCCCCCCTAACTCCATAGGAATGGGAGCGGGAGGGCTAGGAGGTGGAACTGACAGGGAACATAGCACTATTCTTTGACACTCATAAAACTAATGGAAGAAAGTAGGTGCTTAACGAAGTGATTTTTTTATTGACATTCGTTAACAGTATATTTGCTTGAATTGAAAGCGCAGCCTGAGAATTACTGAGCCCAACAGACAACCAAAGAATACTGTCGGGCCAAGAAAATCAAGGAGGACATAGTGGGGACAGACAGTGAAACATATATACCTCAGAGGGTTTCTGAGAACAAAATAATGGTTTTAAAACGTTCACTAGCTGCCATCTCTTAAAGAGGAAATATCATGTGAGATATTTTCAAAATAGGCAACAGATTGATGTTTGAAAATTGCATTGCTTGATCTTCAACCACACAAAATGTGCATAGCATGAGACACATTTTCAACAGTAACTTAAACATACTGCATAAAAACATAgtgtagaaaataaataaataaaaatacatgaatAACTCCCTTCAATCttgtactgtatatctgacagtTTGTCATTTCAAAATGATTTCAGGAACATATTACTGAGTATATTAGAAATTGTTATACATTTCCTGTATATCTTACAGCCTTTCAATTTTATAATAGCAACTGTAAATGCACTCACTATACATTCCAGAATCTTAGTTGTCCAAGGAAAGGAACACGAGATAAAGTGAACAGATTGGATCAGAAACATAGGTCATGTAAGTACAGTAGTGTTTAATGTAAGTTTCTGGTGTCTCTCTTCTAATATCAAACTACTATAACGATGCACATGAGAAGATGGGACATATACAATTAATGAATTGGTCTGCAATCAACTCAGTTATAGGCTTATGTCTGTGTGACAGTGGCATGCTGTCATATACAGTGTTTTCATGTTAAGGCATGGCATTTGCAGACTATAACAGCTGTCATATCCTATTGTGATAAAGTCGCGATAGCATATGTGCATTAAATGTCAACACGAATGTAAATTAATAAAGCAACCCTGTGGGGTCTGTCCTAAAGGATGTGGCATGGCAACCTGGAACGGACAAAAGACACTCCAACATGACGTCCATTTTGAGTCAATTACATTTTCATCATGTCATAGCACATATGGCTGTGGGCAAGGGTAGACATACAGGCATACACTGAAACAAAAGCAAACATGTTAACTCTGCTAAAACACAAGCGGTAACAGGTCAACAGCATTGTATGCTACTGTATTTATTTCAGCAAAAACTATATTTGCAAGTGATGTTAGATTTAAAAATATAATTGATTTTTGTTTGAATAGTGGTATACCTATTTCAGGTGAGTTTACTAAGTGTTAACTCCTTACAAGTGCAACAATTATTCAGGAAGAATAAGATCCAGtacaatctaaacacaatacccgcAAATTTACTTCAAATCATCTCTCTCTTGGTGTTTGAAAATGATAACAAAAAACTTCAATATCTCCTGTTGTGTTTTCCATGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU836774 True 1658 lncRNA 0.38 2 66198228 66199927

Neighbor

gene id symbol gene type direction distance location
LOC110530374 NA coding downstream 101277 66076814 ~ 66096951 (-)
LOC110529131 LOC106569222 coding downstream 303178 65893819 ~ 65895050 (-)
LOC110530368 LOC106569223 coding downstream 315849 65738261 ~ 65882379 (-)
LOC110529129 LOC106569288 coding downstream 505453 65691486 ~ 65692775 (-)
LOC110530362 LOC106569229 coding downstream 560241 65608778 ~ 65637987 (-)
LOC110530388 LOC106569209 coding upstream 73861 66273788 ~ 66332261 (-)
LOC110530389 LOC106569208 coding upstream 138343 66338270 ~ 66381730 (-)
LOC110530391 LOC106569207 coding upstream 190277 66390204 ~ 66433725 (-)
LOC118965631 NA coding upstream 410376 66610303 ~ 66618598 (-)
LOC110530964 LOC106569202 coding upstream 423586 66623513 ~ 66632180 (-)
G736893 NA non-coding downstream 29166 66168482 ~ 66169062 (-)
G736858 NA non-coding downstream 77752 66119950 ~ 66120476 (-)
G736856 NA non-coding downstream 80254 66117772 ~ 66117974 (-)
G736840 NA non-coding downstream 98298 66099728 ~ 66099930 (-)
G736833 NA non-coding downstream 121675 66075644 ~ 66076553 (-)
LOC110530385 LOC106569212 non-coding upstream 4377 66192359 ~ 66210028 (-)
G736915 NA non-coding upstream 7494 66207421 ~ 66207711 (-)
G736918 NA non-coding upstream 19480 66219407 ~ 66219822 (-)
G736950 NA non-coding upstream 61354 66261281 ~ 66261602 (-)
G736951 NA non-coding upstream 62526 66262453 ~ 66262663 (-)
G736841 LOC106569214 other downstream 96601 66101096 ~ 66101627 (-)
G736216 NA other downstream 669645 65518167 ~ 65528583 (-)
G735880 NA other downstream 1157987 64990301 ~ 65040241 (-)
LOC110530961 dhx9 other downstream 4013048 62165849 ~ 62185180 (-)
G731764 NA other downstream 4150109 62045035 ~ 62048119 (-)
G737449 LOC106569204 other upstream 359269 66559196 ~ 66560517 (-)
G737422 LOC106569284 other upstream 513766 66713693 ~ 66714496 (-)
G738472 LOC106569192 other upstream 1181293 67381220 ~ 67381977 (-)
G738502 LOC106569192 other upstream 1220812 67420739 ~ 67421056 (-)
G738504 LOC106569192 other upstream 1223936 67423863 ~ 67425339 (-)

Expression


Co-expression Network