G737426 (LOC106569204)


Basic Information

Item Value
gene id G737426
gene name LOC106569204
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66518495 ~ 66596241 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU837394
CTCAAATGTTTGCTTGTCTTTTATTTCATGATTAATATTCACATCACTAGATAACAATTAATCACAATGAACATCTCTTTCATACCAAATTACATCTCAAATCGAAGGGGAAACAATGAACTCCTATCTATGACAGATGTCTACAATCCATTGTCTTCTGCATGCTCTTATGGTGTGCACTATGGAGAATAATACACACTGCAGGTGTGCTCTAAGACGAAGCACAGCTATGGGCTCCTTGATGCTTTACAGAAGCACACTACATAACACATGCCAAAAGACAGTTACTGTTAGTCTCACATGGGGGATGTGGGAGGGATGTCTGGATGACAATCAAGGGCTGTGTGTGTCAGGTGCTGCATTTGGGAGCATGGCCTTCAACCTATCCTCACAATGCCTGGTTCCTGATTAAAGTTGGGCACTCGGTCAGCTCACCAGTGACACAAAACATTTGGAAGAATAAGTATGAAACCGGATTATTCTTTATTCCATGTAGATTTCTAACATATAGTGAGTACAGGCCTAAGTGTAAGAGGCAGATAAAAGTGTTAATTTATTCCTCTACAGAGTTGGAGTTGGTAATAACACACCTTGACCAACCATTGAGATGCTAACCACCATTCCTACTGTCAAGTCAAATGTagatttagggctctattcaatcagaggcgctttagccgacatccgcatagtgtctgaggtggaactgtgttagagctgtcaaatccacaagtggctctCTCATACCTAAggcggacattgccattggctgcacagtCAAATTATTaacagaaatcccatgcagccttgtttacaactTCAAACACTGGAATGTGATGATGATGGAAATCCTCATTTTGTTgaatgatttttttatttgagtgtaattctatatatatagtgtacatattCTCACTCTGAGCTTCTAATgcgagtgagtgtgtgtgacagCCACCTGACTGTGCATTGTCCCTGACCTTGTGGTTACTGACCTGGTCCTTTATGCATAGTGATGGATTTTACTTTCTCATTCACACTCACATGTTCCTCTTGGCAATTACCATTCCTAGTCTAGCTTTCACGTTAAAAATTCACAATCATGTTAGATTCATAACACTCATCATGACAAGAAGGTACAGCATTTCAAAATGTATTGCAATGTTACAACTCCTCTATTATTCACTGTGACACTAGCaatgactgttaaacagccatcactaacattgagtggctgctgccaacatattgACTCATctatagccactttaataattacaatttggatgtaataaatgtatcactagtcactttaaactatgccactttatataatgtttacatactctacactacttatctcatatgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatc
>TU837391
CTCAAATGTTTGCTTGTCTTTTATTTCATGATTAATATTCACATCACTAGATAACAATTAATCACAATGAACATCTCTTTCATACCAAATTACATCTCAAATCGAAGGGGAAACAATGAACTCCTATCTATGACAGATGTCTACAATCCATTGTCTTCTGCATGCTCTTATGGTGTGCACTATGGAGAATAATACACACTGCAGGTGTGCTCTAAGACGAAGCACAGCTATGGGCTCCTTGATGCTTTACAGAAGCACACTACATAACACATGCCAAAAGACAGTTACTGTTAGTCTCACATGGGGGATGTGGGAGGGATGTCTGGATGACAATCAAGGGCTGTGTGTGTCAGGTGCTGCATTTGGGAGCATGGCCTTCAACCTATCCTCACAATGCCTGGTTCCTGATTAAAGTTGGGCACTCGGTCAGCTCACCAGTGACACAAAACATTTGGAAGAATAAGTATGAAACCGGATTATTCTTTATTCCATGTAGATTTCTAACATATAGTGAGTACAGGCCTAAGTGTAAGAGGCAGATAAAAGTGTTAATTTATTCCTCTACAGAGTTGGAGTTGGTAATAACACACCTTGACCAACCATTGAGATGCTAACCACCATTCCTACTGTCAAGTCAAATGTagatttagggctctattcaatcagaggcgctttagccgacatccgcatagtgtctgaggtggaactgtgttagagctgtcaaatccacaagtggctctCTCATACCTAAggcggacattgccattggctgcacagtCAAATTATTaacagaaatcccatgcagccttgtttacaactTCAAACACTGGAATGTGATGATGATGGAAATCCTCATTTTGTTgaatgatttttttatttgagtgtaattctatatatatagtgtacatattCTCACTCTGAGCTTCTAATgcgagtgtgggggggggggggggggcttcctgATGAttgcaagagcagctgctcaatAACTTGACAGCTCCAACGCAGTTTCCTTCTCCGACACCACCAAAACATTCGCTATGCAGGTGTCTGCTATCGCTggttaacgcttgatctgattgaatctaggccttggTATGTGTCCTATTgtgattttgaaaacaaaacaaaaagttcATACATATGATATTTATGTCTTGCATCTTTAATACATTGCATTTTAAAAACATTCTTGTACTTCAGCCCTTTCTGAAAAAGGCAGACTCCAGAAAGAAAACACTCTCTTTGAAAATGGGTTCATGGATGTGAAATACATTTGTCAACATCCATAAAGACTCTAATATCAATACCTATTTGTTTTTCCTGTGGTGATAAAAACATGTGGATGTCTATTTACAAACGACTGTGTGAAGACTGATGGAAGGATGGTGTTGCAAGCAGAGGTTACGTGTTGGAAAGGGGAGTGTTAACAAACGTGACGTCTAACAGGCACAAGGAGAACAGACAGAGCGAGTGACCATTGTCCCAAAGCACGACACCAAAGTCCACTAACGTGACCAGCAAGGTCACCACCAAGGAGACTAAAAGACAAATCTGTTCATCCAATCATGCCAACAGTTCTAACATACTGTAGAGCTCAAACATAAAATGTACATACCACTGTGCATTCAAAGTGCTTTCATCAGTGTAAGACTTATGCTTCAGGAAGAATTCAATTCATTCCAGTTTTTCAACTAACCATGGGAATCTTGGGGGGGAAAGAATACTTGTAAATATCATAAGGTGCTTTTTCTTTCATTCTCGATATTTTGATAACTTGCTCTTTGATTATCTCTGCCATTGACAATCCCTATTATTTCCTCCACTGCAGTGCACACACTCAAATAAATTCAAATGACACCTTACCGACATCAAGCAGCATTATATCATTACAGTACATAACAATATCTGAAAATAAAAGGGTTTGAGGGTGGGACATAAAgataattttttggggggaacTATACACCTGTTACAGTTCAGCCACAGATTTGTACTAACCCAAGATATACCACCGATGttgtttccaatgggagcaaatgaAGCATATTGAGCAGAACAAGCAAAGAGCTGGGCAAAGCTAAGCACGAACTAGCGAAATCCTATTGGCCCgttctagcatgtatttgcatatttacGCTGGAGAACTCCTACTCTGTGAAGTTGTGATTGTGCAATTACTCAATTTGCCCTTGTAATCCTTCTAAACAATGCCATTTATTTTAGAAAGGGTGAAGTCTCAAAAACTTAGTCTACTCTGTTCTTAACAGAtgttagttttgggaacagaaaactgtattgagatgttTCATCTATCAGAAAATTTGCAGGTTTCATCGAGCTCCATGTTCTCCCACTTCccgccactgggcttcctctcatcacaaTATTTGATGGTGAGAAGAAGCTATAAAGGGATGCTTCAGATTTATACATCCTGTGAGAGATCTGGTTCTAGCCTTGAGAATCTACAAGGCACAATTACACATTAATATCTGGGGCCCTTATCCCTCTTGTTGGAGGTGCCATTTTTGTACTCTAAGAGCCAAACTACCAGTATTTTAAAGGCAATGGGGTGCCCTCGAACTTGATCCAGCAACATACCACTAATATGACAAACTCCACAGACATGCCTAAATGTTGATCAcaacatactacacacacacacacacacacacacactgaatcctAATTCATAGTCATGTAATGTTATACAATTCCGCCAACCTCTTTACAAAACCGACAGCAAGTTAATCTGAGTAATTAGCTTCtttgttaaaaaaaagaaagaaaactgCTCCAATAAGAAATTGTGCGCTATTGTTACACAATAATGTCACTTTTCACAGTGGAACCAATAGCATAAGCAGCCATTCAAATGAATTCATATTTAACAGTGGAGTAGTTGAAAAGACTGACAATTGTTACATTGGAGATCAATAAATGACTGTCTTTGTTCGTCACAAGCTTCTCTTGATACTGACTTAAAATGGTGATTATATTGTTAAATGTATCTATCTAAATCTTGCTTTCCTTCAAAACGTCTTTCTATTCGTCTTCCCTGTCCCAACACTACAGAGACTTGATCACTGGGGGACAACACAAACAGCATTGGAGTATCTTTACTCTCCTGGTGCAATCATAGGCCTTTCCTCACTCTGTTTGCTGCCTCCTGCTTACTATTTTGCCCTGTCCCAGGCATCCAGTCTCTGTGCACAGACCCTGCAGGggtttgtttgtctctctctccctctgactgtACCGTACTGCACACATGTGCGgggatgtgtgtgtatgaggaagTTGTATCCTCGGCAAAGACCACTCACTGTATTGCTTTCAGAGAGATGTAACAGTAAAAGGAAAATGGTATATTATGATGAAACCACATAACAACACATCAGCTCATTGTTACAATAATTGACGAAAACACGATACAGAGTTTTTTAAAGAGATGTTAAATATCCTACTGTTTGTAACAGCCTACTAGTATCTTGTTGTTGAGAGTGCTGTGGGGGAATCACACGTTTACAAAGGGTTATCTAGACAAACTGTATTGGTTAAGAGAGGGAGTGGCATATTAGCCCCTGTTCATTGGGATGACATGACAATCCCACATGCTCACAATAAGGGGTGCTTCACTAATCGCCAttgtataatgtactgtatacaaCTCAAGTGAAATCTGGGGTCCCAACAGTACAAGGGGAGTTATGCTCGTCCAGAGAGATAGGTACAGTAAGGAAGGTGTTACGTCTAGGGTAAGGCCTGTCACATAGATAGCATTGGCTCATTGTGATGGTCTGACGTAAAATACGTACAAATGTACAGTCTGACACTGAAGGTGTTTGTGATTTTAATCGAGGTGGCACTACGTATAAGAACAGAAATTATAGGCTGGAACAAAAGAAGCAGGCAGTATAATAAGTTTCATTCTGCGCTGACATAACTATAACAGAACACTGAGGGTCTAGATTCCAGAAGGTTCACTCTGAGGTCATACTACTCCCCTTATATCACAGCAAGTTAAGCCAGGACAATTCAGAAGAGACCAAACCCCACTGTACAGTAAGAGCTTGTCTATCTATCTGAACTCTGGTCTCTATACTTTAATACTGGCTCCTCTGAGACCAGAAGACTAGGAAAAATATTCCACAAGGACAGAGAGTAGTGATTAGATACAGTATGGTAAAAGGAGAGGTAAAAGGTCAAATGAAGGTGCTGGAGGAAGTTGAAATGTGCTAAAGAAGTCCCTGTCCTGCTAGCATTCAGTAGTTGTCCCCCTGCCTCATGTCTGTGTGACGAGGGTCTGGGTTGGAGCTGGAGGGTGTGGAGGAGAAAGCTGGCGGACCCCCAGAGAAACACTGAGAGAGGTGCTGCGATGAGGGTGAGGTGTGGCTGTCAATCGGGGTGGGCCGGGAGATGATGTCGGCGCCGTGGTTCGTGCAAGCCCGTGCACGCTTGCGAAAGCTCAGCTTGTAAGACTCAATTTGTCTCAGGGATGCGTTTGTCCATGCCCATGCCTATCGGGTCTCGCAGCCCATCACCCCCAAAGGGATTAGGGTGAGGTGTGGCCTCCTTATGTCCGTTCTCCTTAGCCATACTTCTTGCACCTGTGGCTGGAGCTCCACCAGGGGGAGATGTTTTCCCCTCAGCTTTCTCCTGCATCCCCCCAGCCTTGTTTTGTACATCCTCTGCCTCAAGGCCAATATTGTCCATTGACCCCACCTTGGGCTTGCCATTACCATTGGCCTTAGCCTCAATCTTCACATCGCCACCCCCTGGCTTGTGCTTGATGTTGTCCTTAGAGCCACACTTGGAGGTCACTTTGCTCAAGTCCACCTTCTTATGCTGAATCTGGACCTTGCCCTGGCCGTCTTTGGATTGGGAACCCCCCGCC
>TU837392
CTCAAATGTTTGCTTGTCTTTTATTTCATGATTAATATTCACATCACTAGATAACAATTAATCACAATGAACATCTCTTTCATACCAAATTACATCTCAAATCGAAGGGGAAACAATGAACTCCTATCTATGACAGATGTCTACAATCCATTGTCTTCTGCATGCTCTTATGGTGTGCACTATGGAGAATAATACACACTGCAGGTGTGCTCTAAGACGAAGCACAGCTATGGGCTCCTTGATGCTTTACAGAAGCACACTACATAACACATGCCAAAAGACAGTTACTGTTAGTCTCACATGGGGGATGTGGGAGGGATGTCTGGATGACAATCAAGGGCTGTGTGTGTCAGGTGCTGCATTTGGGAGCATGGCCTTCAACCTATCCTCACAATGCCTGGTTCCTGATTAAAGTTGGGCACTCGGTCAGCTCACCAGTGACACAAAACATTTGGAAGAATAAGTATGAAACCGGATTATTCTTTATTCCATGTAGATTTCTAACATATAGTGAGTACAGGCCTAAGTGTAAGAGGCAGATAAAAGTGTTAATTTATTCCTCTACAGAGTTGGAGTTGGTAATAACACACCTTGACCAACCATTGAGATGCTAACCACCATTCCTACTGTCAAGTCAAATGTagatttagggctctattcaatcagaggcgctttagccgacatccgcatagtgtctgagTGAGATTTGAGAAAGACCACAGGGTGTTTGTTGAGGCAAGAGGCACCTACTTGTCTCAGGGATGCGTTTGTCCATGCCCATGCCTATCGGGTCTCGCAGCCCATCACCCCCAAAGGGATTAGGGTGAGGTGTGGCCTCCTTATGTCCGTTCTCCTTAGCCATACTTCTTGCACCTGTGGCTGGAGCTCCACCAGGGGGAGATGTTTTCCCCTCAGCTTTCTCCTGCATCCCCCCAGCCTTGTTTTGTACATCCTCTGCCTCAAGGCCAATATTGTCCATTGACCCCACCTTGGGCTTGCCATTACCATTGGCCTTAGCCTCAATCTTCACATCGCCACCCCCTGGCTTGTGCTTGATGTTGTCCTTAGAGCCACACTTGGAGGTCACTTTGCTCAAGTCCACCTTCTTATGCTGAATCTGGACCTGAATGCATCCaaacaaacaatacaaatgtTGAAGTATGAATGGCAAAGGTGAAACAACACCCACTCTGACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU837394 False 1492 lncRNA 0.39 2 66518495 66596241
TU837391 False 4900 lncRNA 0.42 5 66588172 66596241
TU837392 True 1196 lncRNA 0.45 4 66590338 66596241

Neighbor

gene id symbol gene type direction distance location
LOC110530391 LOC106569207 coding downstream 84770 66390204 ~ 66433725 (-)
LOC110530389 LOC106569208 coding downstream 136765 66338270 ~ 66381730 (-)
LOC110530388 LOC106569209 coding downstream 186234 66273788 ~ 66332261 (-)
LOC110530385 LOC106569212 coding downstream 308467 66192359 ~ 66210028 (-)
LOC110530374 NA coding downstream 421544 66076814 ~ 66096951 (-)
LOC118965631 NA coding upstream 14062 66610303 ~ 66618598 (-)
LOC110530964 LOC106569202 coding upstream 27272 66623513 ~ 66632180 (-)
LOC118936436 LOC106569202 coding upstream 37684 66633925 ~ 66636934 (-)
LOC110530394 LOC106569203 coding upstream 53622 66649863 ~ 66658816 (-)
elovl1a LOC106569200 coding upstream 76219 66672460 ~ 66682947 (-)
G737407 NA non-coding downstream 11419 66506875 ~ 66507076 (-)
G737406 LOC106569206 non-coding downstream 13157 66505064 ~ 66505338 (-)
G737405 NA non-coding downstream 14008 66504262 ~ 66504487 (-)
G737404 LOC107688523 non-coding downstream 14786 66503482 ~ 66503709 (-)
G736973 NA non-coding downstream 212406 66305819 ~ 66306089 (-)
G737462 NA non-coding upstream 2026 66598267 ~ 66598698 (-)
G737466 NA non-coding upstream 6699 66602940 ~ 66603157 (-)
G737471 NA non-coding upstream 20620 66616861 ~ 66617269 (-)
G737472 NA non-coding upstream 23220 66619461 ~ 66619772 (-)
G737421 NA non-coding upstream 51909 66648150 ~ 66648459 (-)
G736841 LOC106569214 other downstream 416868 66101096 ~ 66101627 (-)
G736216 NA other downstream 989912 65518167 ~ 65528583 (-)
G735880 NA other downstream 1478254 64990301 ~ 65040241 (-)
LOC110530961 dhx9 other downstream 4333315 62165849 ~ 62185180 (-)
G737422 LOC106569284 other upstream 117452 66713693 ~ 66714496 (-)
G738472 LOC106569192 other upstream 784979 67381220 ~ 67381977 (-)
G738502 LOC106569192 other upstream 824498 67420739 ~ 67421056 (-)
G738504 LOC106569192 other upstream 827622 67423863 ~ 67425339 (-)
igfbp1 igfbp1 other upstream 2554102 69150343 ~ 69157726 (-)

Expression


Co-expression Network