G738397


Basic Information

Item Value
gene id G738397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67271931 ~ 67291670 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU838462
CGGAAAATAACGTTGCTAGCTACCGAGTACATGATGAAATACCAAGAAGGCAGTTGGGAAGAGTCAaaatcaggtgggaccattctagccaatgagggCAGATACCAatgactcccgagtggcgcagcggtctaaggcactgcatctctagaggcatcactacagacaccctcgTTCaaatccggccatgattgggagtccaatataatttaaaaAAGACTTGCTGTACCAACAAATCTTCTGCAAGAGGTTGATGCAGTGGGTGGTAAAGAAAGGGTACAAGCCCAGAACCCACCACTTCAGGGAGAGGCTTGTCCGCCTGGCTGTGGAGTGCAGAAAGGACCAGACGGTTGTCTACAAGGAACCAGAGTCACAGCTCCCCAAACCTAACATTCCTGCCAACATCGCCTCAGTGCCAACATCTTCTAAACCAGCTGCCATTACCCA
>TU838464
CGGAAAATAACGTTGCTAGCTACCGAGTACATGATGAAATACCAAGAAGGCAGTTGGGAAGAGTCAaaatcaggtgggaccattctagccaatgagggCAGATACCAatgactcccgagtggcgcagcggtctaaggcactgcatctctagaggcatcactacagacaccctcgTTCaaatccggccatgattgggagtccaatataatttaaaagtaagCATTGAAGTGTCTGTAATATATTAAACTTGTCAAAAAcggatgtagacattaataaatgcatttctatagct

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU838462 False 447 lncRNA 0.50 3 67271931 67291670
TU838464 True 292 lncRNA 0.42 2 67290176 67291670

Neighbor

gene id symbol gene type direction distance location
LOC110530968 LOC106569194 coding downstream 95763 67055158 ~ 67176168 (-)
gs02 gs02 coding downstream 470152 66798543 ~ 66801779 (-)
elovl1a LOC106569200 coding downstream 588984 66672460 ~ 66682947 (-)
LOC110530394 LOC106569203 coding downstream 613115 66649863 ~ 66658816 (-)
LOC118936436 LOC106569202 coding downstream 634997 66633925 ~ 66636934 (-)
LOC110530404 LOC106569189 coding upstream 186322 67477992 ~ 67528795 (-)
kdsr LOC106569188 coding upstream 238135 67529805 ~ 67537441 (-)
LOC110530405 LOC106569187 coding upstream 246082 67537752 ~ 67570811 (-)
LOC110530412 LOC106569180 coding upstream 478079 67769749 ~ 67818199 (-)
LOC110530414 LOC106569178 coding upstream 649645 67941315 ~ 68125947 (-)
G738051 NA non-coding downstream 25994 67245593 ~ 67245937 (-)
G738039 NA non-coding downstream 31824 67239885 ~ 67240107 (-)
G738022 NA non-coding downstream 39434 67232282 ~ 67232497 (-)
G737902 NA non-coding downstream 140056 67042520 ~ 67131875 (-)
G737923 NA non-coding downstream 174328 67096974 ~ 67097603 (-)
G738473 NA non-coding upstream 91433 67383103 ~ 67383313 (-)
G738474 NA non-coding upstream 92563 67384233 ~ 67384497 (-)
G738475 NA non-coding upstream 93185 67384855 ~ 67385178 (-)
G738477 LOC106599252 non-coding upstream 94587 67386257 ~ 67387130 (-)
G738478 LOC106569192 non-coding upstream 97688 67389358 ~ 67390228 (-)
G737422 LOC106569284 other downstream 557435 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 711414 66559196 ~ 66560517 (-)
LOC110530385 LOC106569212 other downstream 1061940 66192359 ~ 66210028 (-)
G736841 LOC106569214 other downstream 1170304 66101096 ~ 66101627 (-)
G736216 NA other downstream 1743348 65518167 ~ 65528583 (-)
G738472 LOC106569192 other upstream 89550 67381220 ~ 67381977 (-)
G738502 LOC106569192 other upstream 129069 67420739 ~ 67421056 (-)
G738504 LOC106569192 other upstream 132193 67423863 ~ 67425339 (-)
igfbp1 igfbp1 other upstream 1858673 69150343 ~ 69157726 (-)
G740718 LOC106569160 other upstream 2117298 69408968 ~ 69430653 (-)

Expression


Co-expression Network