G738489 (LOC106569192)


Basic Information

Item Value
gene id G738489
gene name LOC106569192
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67406714 ~ 67407245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU838564
gaaatgcttaatttttAAAGTAAAACATAGGTATTAAGTAAACAAAAGATAAATATGGAAATAataaacaacagtaaagacagtgaaaaataacagtagcgagtctatatacaggcAGCGGTTAgttgggctaattgaggtaatatgtatgtGTAGGTATGGTTAATGTGACTATGCCTATAAGTGTTATGTGATGTTTAAGTCTACTCCCTACCTGTTTGAGCTGGGTCATTAGTGTATCAGTGCTGGAGTGCACCAGTTgcttctcctccccttctttcttcctcttcttGTAACGAGAGGCGGGCCGCTCTCCTCCTTTGGGGTTCCTCTTGTTCCTGCCTTTCCTCTTATCCTGTCCTGTGAGCAGTGGTCCTGGGAACTCTGGAAGGCCAGAGAGCTGTCCGTCTGAATACGCCTGGGAGGAGGTAGATGAGTAATGTGTCAATTGTCATAGAGACACTAGTAAGAAAGCAGTGTCTCGTTTATCGGCAAtcacaaaaatatctatataaaaaaaacatgacatgAT

Function

NR:

description
histone-lysine N-methyltransferase 2C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU838564 True 532 lncRNA 0.41 1 67406714 67407245

Neighbor

gene id symbol gene type direction distance location
LOC110530968 LOC106569194 coding downstream 230546 67055158 ~ 67176168 (-)
gs02 gs02 coding downstream 604935 66798543 ~ 66801779 (-)
elovl1a LOC106569200 coding downstream 723767 66672460 ~ 66682947 (-)
LOC110530394 LOC106569203 coding downstream 747898 66649863 ~ 66658816 (-)
LOC118936436 LOC106569202 coding downstream 769780 66633925 ~ 66636934 (-)
LOC110530404 LOC106569189 coding upstream 70747 67477992 ~ 67528795 (-)
kdsr LOC106569188 coding upstream 122560 67529805 ~ 67537441 (-)
LOC110530405 LOC106569187 coding upstream 130507 67537752 ~ 67570811 (-)
LOC110530412 LOC106569180 coding upstream 362504 67769749 ~ 67818199 (-)
LOC110530414 LOC106569178 coding upstream 534070 67941315 ~ 68125947 (-)
G738485 LOC106569192 non-coding downstream 5406 67401015 ~ 67401308 (-)
G738484 LOC106569192 non-coding downstream 6010 67398804 ~ 67400704 (-)
G738483 LOC106569192 non-coding downstream 9063 67397417 ~ 67397651 (-)
G738482 NA non-coding downstream 10561 67395826 ~ 67396153 (-)
G738481 NA non-coding downstream 12219 67393477 ~ 67394495 (-)
G738491 NA non-coding upstream 1565 67408810 ~ 67409253 (-)
G738495 NA non-coding upstream 5077 67412322 ~ 67412845 (-)
G738503 NA non-coding upstream 15997 67423242 ~ 67423699 (-)
G738504 LOC106569192 non-coding upstream 17573 67423863 ~ 67425339 (-)
G738506 NA non-coding upstream 19721 67426966 ~ 67427322 (-)
G738472 LOC106569192 other downstream 24737 67381220 ~ 67381977 (-)
G737422 LOC106569284 other downstream 692218 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 846197 66559196 ~ 66560517 (-)
LOC110530385 LOC106569212 other downstream 1196723 66192359 ~ 66210028 (-)
G736841 LOC106569214 other downstream 1305087 66101096 ~ 66101627 (-)
G738502 LOC106569192 other upstream 13494 67420739 ~ 67421056 (-)
igfbp1 igfbp1 other upstream 1743098 69150343 ~ 69157726 (-)
G740718 LOC106569160 other upstream 2001723 69408968 ~ 69430653 (-)
G741077 foxc1 other upstream 2318529 69725774 ~ 69727431 (-)

Expression


Co-expression Network