G738507


Basic Information

Item Value
gene id G738507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67429266 ~ 67430037 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU838584
GATGTCATTTTATACAAGAGAAGAAAAATATCCAAGAAACAATTTTGTTACAACCATTCATTGAGAAAATATATACAATTGAGTCTTCGGAAAGTTAAAAAAATACCATGCCATATACATTACAAGTTCTAAGACTGTCTCCAATATTTTACAGTCGAGTTGAAATTGTGCTCGCAAAACATCTAACTACTGTATGTGGCTTGTGATGTGTCAATATCACATACATTTCTGATTAAGTAGAATGTCATCTCTTTTCAAAATGTAGCACCACCAAATGTCCCGACCTTTTCCTCTGCAagaaacattattttattttttcagtACACTTTAATTTCAAACGCCTGAAGCAGTAAGCAATGTCATACGACGTCTGTACACCatttctatgtaaaaaaaaacagaaaaaacaaGGTTATATTCCTACACATATTTGGGTTAAAAAGAAGTTAAAATTGTGTTTGGGTGGTTTAAAACCTTTTCACAGCTCTATAAAATCAAACCTGATTAACAGCAAAGATGTCAGAATGATGTCTTTACCATTTTTTATTCATTAACCAATAACTCATTTCCACACTCAGTCACCAAAAATATTTCTTTTTGAGTGGTCAAAGTACGTGTAAATCACAAAAACACTAAGCTACAATACCATACTTT
>TU838585
CTAAATTCAATTCCAAACTCCAACCCTCATATTTCTCTGTACAGTTCTAAatgcatttttaaaaacattttgagaCTACAGGACCAAGAAAAATGTAGCACAAACACACTGGTAGGACGATGTCATTTTATACAAGAGAAGAAAAATATCCAAGAAACAATTTTGTTACAACCATTCATTGAGAAAATATATACAATTGAGTCTTCGGAAAGTTAAAAAAATACCATGCCATATACATTACAAGTTCTAAGACTGTCTCCAATATTTTACAGTCGAGTTGAAATTGTGCTCGCAAAACATCTAACTACTGTATGTGGCTTGTGATGTGTCAATATCACATACATTTCTGATTAAGTAGAATGTCATCTCTTTTCAAAATGTAGCACCACCAAATGTCCCGACCTTTTCCTCTGCAagaaacattattttattttttcagtACACTTTAATTTCAAACGCCTGAAGCAGTAAGCAATGTCATACGACGTCTGTACACCatttctatgtaaaaaaaaacagaaaaaacaaG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU838584 False 654 lncRNA 0.31 1 67429266 67429919
TU838585 True 529 lncRNA 0.33 1 67429509 67430037

Neighbor

gene id symbol gene type direction distance location
LOC110530968 LOC106569194 coding downstream 253098 67055158 ~ 67176168 (-)
gs02 gs02 coding downstream 627487 66798543 ~ 66801779 (-)
elovl1a LOC106569200 coding downstream 746319 66672460 ~ 66682947 (-)
LOC110530394 LOC106569203 coding downstream 770450 66649863 ~ 66658816 (-)
LOC118936436 LOC106569202 coding downstream 792332 66633925 ~ 66636934 (-)
LOC110530404 LOC106569189 coding upstream 47955 67477992 ~ 67528795 (-)
kdsr LOC106569188 coding upstream 99768 67529805 ~ 67537441 (-)
LOC110530405 LOC106569187 coding upstream 107715 67537752 ~ 67570811 (-)
LOC110530412 LOC106569180 coding upstream 339712 67769749 ~ 67818199 (-)
LOC110530414 LOC106569178 coding upstream 511278 67941315 ~ 68125947 (-)
G738508 NA non-coding downstream 288 67428224 ~ 67428978 (-)
G738506 NA non-coding downstream 1944 67426966 ~ 67427322 (-)
G738504 LOC106569192 non-coding downstream 3927 67423863 ~ 67425339 (-)
G738503 NA non-coding downstream 5567 67423242 ~ 67423699 (-)
G738495 NA non-coding downstream 16421 67412322 ~ 67412845 (-)
G738562 NA non-coding upstream 63978 67494015 ~ 67494521 (-)
G738587 NA non-coding upstream 146283 67576320 ~ 67576541 (-)
G738616 NA non-coding upstream 242975 67673012 ~ 67673616 (-)
G738670 LOC106569186 non-coding upstream 253196 67683233 ~ 67683955 (-)
G738613 NA non-coding upstream 262123 67692160 ~ 67693632 (-)
G738502 LOC106569192 other downstream 8210 67420739 ~ 67421056 (-)
G738472 LOC106569192 other downstream 47289 67381220 ~ 67381977 (-)
G737422 LOC106569284 other downstream 714770 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 868749 66559196 ~ 66560517 (-)
igfbp1 igfbp1 other upstream 1720306 69150343 ~ 69157726 (-)
G740718 LOC106569160 other upstream 1978931 69408968 ~ 69430653 (-)
G741077 foxc1 other upstream 2295737 69725774 ~ 69727431 (-)
G741177 NA other upstream 2352252 69782289 ~ 69783294 (-)
LOC110530971 NA other upstream 2721770 70148848 ~ 70160838 (-)

Expression


Co-expression Network