G740468


Basic Information

Item Value
gene id G740468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69146733 ~ 69149813 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU840734
TGGTGTCAACTTTACTGCATTTATTTGTTATAAATACACTTTTTTGATACAAGGATAGAGAATATTGACCTTTAACCAAGGCACAGCTAAAAGGTGAAAAGGAATCTCTGAAAACAGAAAAAcgtgccaagtgtcacgtctggagggaaactggcaccatctctacggtgaagaatggtggtggcagcatcatgttgtagggatatttttcagcgtcagggactgggagaaactagtcaggaatgagggaaagacaaacggagcaaagcacagagatccttgatgaaaacctgctccagagtgctcaggacctcagactggggtaaatgttcaccttccaacaggacaatgaccctaaacacacagccaatacaacgcaggagtggcttcgggataagtcactgaatgtccttgagtggcccacccagagcccggacttgaacccgattgaacatctccggagagacctgaaaatagctgtgcagcgacactccccatccaatctgacagagcttgagaggatctggaaagaagaatgggagaaactctccaaatacaggtgtgccaagcttgtagcgtcatacccaagaagactaacgaggctgtaattgctgccaaaggtgcttcaacaaagtactgagtgaagggtctgaatacttacgtaagtgtcatatttcagttttttacttttaataaattagcaaaaatgtgtaaaaaaaatgtttttgctttatcattatggggtattgtgtgtagattgatgatgggaaaaaaacaatttaatcaattttagaataagactgtaacgtaacaaaatgtggaaaaagtcaagtggtctgaacattttcagaatgcactgtatgttccaCTGGTAGAAGTATAGGGAATGTACTTACATGAAGATGTATATGAGTTGCATAGGGAAGATGAGAACAGTATCCAGCTCTATAGTCAACTCCCTTAAATGGTCCTGAGGAAAGGGCAGTGATGCTGCAGTGAGATACAGGTTGGACTAAAAGCTGATGTATGTGTCCTCTGGCACAAAGTGGGAAGGCGTTTTATGACACTGTACTGTGTCACTGGGTGGTCACACACCAGCGGTTACACAGATAGACACACTTGtatttcactcacacacacacacacacacacacacacacacacacacacacacacacaaatacatacagtaacatatcaAACATACAGAATTACTGTATATAAGTCTCTGTCATCAAGTCTGTAATCATCAAGGCTAGGCCTCTGCAATGGAATTAATTATCTAATTTGTCCTTAGAAGTACTGCCCTCTGTCTATGGAGAATCCATCCACACACTGCTTACAGGAGCAGCACATAGCATTGGAGAGTGTGTGTTGGACACAAGGAGTGTGATTGGATGAGTCCTCTTCTCAAGCCACTCCTCCTGCCCTGCCTTCCATCCTCCTGCCCTGCCTTCCTGTTGGCCGAAGTATCATCAATGCCAGCCAACACGTCCAGGCCCAGCCATTTTGGACCCTTTTGGATCCCAATATCCTCATAGTTTTTCTGTGTGTTCATGGctcccttttctttctctccgcctctctctctctctctctggttccttcTTGCTGCTCAGGTCTTATTGGCTCTCAGAGTTGTAGCACTGggtgtctcctctctccttcccgttGAAACTTGGCAATGGCTGCCCATACTTGTCGACACACCAGCAAAACCCTCGCTTTCTGCCCTTGGATGGacggcactgtgtgtgtgagggagagagagaaagggagagaaagaaacagagagagttacagagagagggagagggtaacAGCGaaagagttacagagagagaattacagagagagagagttacagagagagaattacagagagagagagagttacagcaagagagagagttacagagagagaattacagagagagagagagatacagcaaGAGCGTtacagagagagttacagagagagagagggagagagtaacagcatgagagttacagagagagagagagttacagagagagagagagttacagagagagtgagttacagagagagttacagagagagagagagagggagcgaaaggGTTACAGAGATAAAGTTAGAGAGAGTTACAGCAAgatagttacagagagagagagagagagagagttacagagagaaagttacagagagagagagttacagagagagagagagttagagagagagttacagagagagagagttacagagagttacacagagagagagagaattagagagagagagagagagagttacagagagaaagttacagagagagagagagttacagagagagagagagagttacagagagagagagttacagagagagagagagagttacagagagagagagttacagagagagagagagagttacagagagagagagttacagagagcgagagttacagagagaaagttacagagagagagagaaagagctacagagagagagagctacagagagagagctacagagagagagagatacagagagagagctacagagagagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU840734 True 2561 lncRNA 0.44 2 69146733 69149813

Neighbor

gene id symbol gene type direction distance location
LOC110530426 LOC106569167 coding downstream 151473 68908995 ~ 68995260 (-)
LOC110530425 tbb2a coding downstream 238545 68901719 ~ 68908188 (-)
LOC110530423 LOC106569170 coding downstream 290699 68834340 ~ 68856034 (-)
LOC110530422 LOC106569171 coding downstream 499987 68542258 ~ 68646746 (-)
LOC110530421 LOC106569173 coding downstream 835696 68303741 ~ 68311037 (-)
igfbp1 igfbp1 coding upstream 1497 69150343 ~ 69157726 (-)
LOC110530970 LOC106569164 coding upstream 33354 69114482 ~ 69240965 (-)
si:ch73-40a17.3 mep1b coding upstream 284729 69434542 ~ 69450423 (-)
LOC118965618 rnf138 coding upstream 312107 69461920 ~ 69474389 (-)
LOC110530436 rnf138 coding upstream 327493 69477306 ~ 69487134 (-)
G740478 NA non-coding downstream 77540 69068630 ~ 69069193 (-)
G740448 LOC106599719 non-coding downstream 121861 69024018 ~ 69024872 (-)
G740438 NA non-coding downstream 140126 69006333 ~ 69006607 (-)
G740437 NA non-coding downstream 140502 69006005 ~ 69006231 (-)
G740436 NA non-coding downstream 140743 69005773 ~ 69005990 (-)
G740604 NA non-coding upstream 101086 69250899 ~ 69263627 (-)
G740684 LOC106569160 non-coding upstream 206101 69355914 ~ 69357999 (-)
G740685 NA non-coding upstream 209569 69359382 ~ 69359622 (-)
G740689 NA non-coding upstream 215354 69365167 ~ 69365498 (-)
G740691 NA non-coding upstream 217582 69367395 ~ 69367614 (-)
G738504 LOC106569192 other downstream 1721394 67423863 ~ 67425339 (-)
G738502 LOC106569192 other downstream 1725677 67420739 ~ 67421056 (-)
G738472 LOC106569192 other downstream 1764756 67381220 ~ 67381977 (-)
G737422 LOC106569284 other downstream 2432237 66713693 ~ 66714496 (-)
G737449 LOC106569204 other downstream 2586216 66559196 ~ 66560517 (-)
G740718 LOC106569160 other upstream 259155 69408968 ~ 69430653 (-)
G741077 foxc1 other upstream 575961 69725774 ~ 69727431 (-)
G741177 NA other upstream 632476 69782289 ~ 69783294 (-)
LOC110530971 NA other upstream 1001994 70148848 ~ 70160838 (-)

Expression


Co-expression Network